RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MED23Q9ULK4 1368 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CFAP47Q6ZTR5 3102 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 CLTCL1P53675 1640 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 SLC17A3O00476 420 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 COPEO14579 308 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 APOMO95445 188 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 C8GP07360 202 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FGF6P10767 208 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 GTF2F2P13984 249 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 HIST1H1TP22492 207 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 G0S2P27469 103 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 BLVRAP53004 296 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00315P59091 139 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 RAB4BP61018 213 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 NAA20P61599 178 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 HBG1P69891 147 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 HBG2P69892 147 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 PSG4Q00888 419 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LY6EQ16553 131 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MESTQ5EB52 335 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FAM131AQ6UXB0 335 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 OLIG3Q7RTU3 272 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 FUNDC1Q8IVP5 155 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 C3orf56Q8N813 242 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LINC01587Q99440 93 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 LYSTQ99698 3801 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF471Q9BX82 626 aaPredicted RBP0.56□□□□□ -2.32
HIF1A-204ENST00000539097 TP73-AS1Q9UF72 201 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 SOGA1O94964 1423 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 MED13Q9UHV7 2174 aa0.56□□□□□ -2.32
HIF1A-204ENST00000539097 A0A096LPI6 279 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV19A0A0A6YYK7 116 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV1D-43A0A0B4J1Z2 117 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 A0A0J9YY10 115 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1B0GX78 115 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RBFOX3A6NFN3 312 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C16orf90A8MZG2 172 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 INMT-MINDY4F8WBC2 141 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C1QCP02747 245 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 REG1AP05451 166 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 COX6A1P12074 109 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 LGALS3P17931 250 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 NFYAP23511 347 aaPredicted RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 F8A1P23610 371 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ALDH3A1P30838 453 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 CDK9P50750 372 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR4D2P58180 307 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 HSPE1P61604 102 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 STX4Q12846 297 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SLC9A3R2Q15599 337 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 LGALS9BQ3B8N2 356 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ARHGAP11BQ3KRB8 267 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 LUZP6Q538Z0 58 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 LGALS9CQ6DKI2 356 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 IDO2Q6ZQW0 420 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 Q8NDZ9 215 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR4M2Q8NGB6 313 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR4P4Q8NGL7 312 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 NUDT9Q9BW91 350 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C11orf49Q9H6J7 331 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TPT1P8Q9HAU6 139 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RWDD2AQ9UIY3 292 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SNX10Q9Y5X0 201 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 HIVEP2P31629 2446 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TOGARAM1Q9Y4F4 1720 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C1orf167Q5SNV9 1468 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ALS2Q96Q42 1657 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TANC1Q9C0D5 1861 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ARHGAP32A7KAX9 2087 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TENM1Q9UKZ4 2725 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TIAM2Q8IVF5 1701 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MGAMO43451 1857 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TRPM7Q96QT4 1865 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1B0GV90 55 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1B0GVG6 124 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1B0GX51 115 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM235A6NFC5 223 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RFPL4AA6NLU0 287 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SYCE1LA8MT33 242 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RFPL4AL1F8VTS6 287 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 BHLHE40O14503 412 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MFSD11O43934 449 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SNAP29O95721 258 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 IGF2P01344 180 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 HLA-DQB1P01920 261 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TSPAN19P0C672 248 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 CXCL2P19875 107 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 REG1BP48304 166 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 PRKCDQ05655 676 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF616Q08AN1 781 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 KPRPQ5T749 579 aaPredicted RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TEX36Q5VZQ5 186 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF880Q6PDB4 577 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SHISA6Q6ZSJ9 500 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 DEFB128Q7Z7B8 93 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 Q8NAQ8 132 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR1L8Q8NGR8 309 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR1J4Q8NGS1 313 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR13D1Q8NGV5 346 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms