RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HCP5Q6MZN7 132 aa11.91□□□□□ -0.5
ATL3-203ENST00000538786 TMEM144Q7Z5S9 345 aa11.91□□□□□ -0.5
ATL3-203ENST00000538786 CACNG8Q8WXS5 425 aa11.91□□□□□ -0.5
ATL3-203ENST00000538786 SIGLEC9Q9Y336 463 aa11.91□□□□□ -0.5
ATL3-203ENST00000538786 A0A1W2PPV4 95 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 CNTFRP26992 372 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 GPX4P36969 197 aaPredicted RBP11.9□□□□□ -0.5
ATL3-203ENST00000538786 CEBPGP53567 150 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 B2MP61769 119 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 CD69Q07108 199 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 TMEM249Q2WGJ8 235 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 MRPL41Q8IXM3 137 aaKnown RBP11.9□□□□□ -0.5
ATL3-203ENST00000538786 SSMEM1Q8WWF3 244 aa11.9□□□□□ -0.5
ATL3-203ENST00000538786 PUS1Q9Y606 427 aaKnown RBP eCLIP11.9□□□□□ -0.5
ATL3-203ENST00000538786 SPTBN1Q01082 2364 aaKnown RBP11.9□□□□□ -0.5
ATL3-203ENST00000538786 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 ACTL6BO94805 426 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 DEFA4P12838 97 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 KLRD1Q13241 179 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 GAMTQ14353 236 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 RHEBQ15382 184 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 STPG3Q8N7X2 389 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.51
ATL3-203ENST00000538786 IGFBPL1Q8WX77 278 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 RPS10P5Q9NQ39 176 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 MANBALQ9NQG1 85 aa11.9□□□□□ -0.51
ATL3-203ENST00000538786 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.51
ATL3-203ENST00000538786 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 H3BQ15 152 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 TIMM23O14925 209 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 SNRNP70P08621 437 aaKnown RBP11.89□□□□□ -0.51
ATL3-203ENST00000538786 PSMB3P49720 205 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PRR20EP86478 221 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PRR20CP86479 221 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PRR20DP86480 221 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PRR20BP86481 221 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PRR20AP86496 221 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PAX2Q02962 417 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 HABP2Q14520 560 aaPredicted RBP11.89□□□□□ -0.51
ATL3-203ENST00000538786 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 SLC35E3Q7Z769 313 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 PPP1R27Q86WC6 154 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 C20orf24Q9BUV8 137 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
ATL3-203ENST00000538786 LRBAP50851 2863 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 VENTXO95231 258 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 RPL27AP46776 148 aaKnown RBP11.88□□□□□ -0.51
ATL3-203ENST00000538786 COMPP49747 757 aaPredicted RBP11.88□□□□□ -0.51
ATL3-203ENST00000538786 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
ATL3-203ENST00000538786 TNXAQ16473 311 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 SLC16A13Q7RTY0 426 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 BPESC1Q9GZL8 116 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 SLC45A2Q9UMX9 530 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 IGLC7A0M8Q6 106 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
ATL3-203ENST00000538786 IGHV4-39P01824 125 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 LMO4P61968 165 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 LCN2P80188 198 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 SMUG1Q53HV7 270 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 FAM90A2PQ658T7 463 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 CFHR4Q92496 578 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 NIPSNAP3BQ9BS92 247 aa11.88□□□□□ -0.51
ATL3-203ENST00000538786 KLF2Q9Y5W3 355 aaPredicted RBP11.88□□□□□ -0.51
ATL3-203ENST00000538786 IGKV1OR2-108A0A075B7D4 117 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 IGHV2-70DA0A0C4DH43 119 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 AKR1C3P42330 323 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 CD81P60033 236 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 MLANAQ16655 118 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 LHFPL4Q7Z7J7 247 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 ZNF114Q8NC26 417 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 SLC35E1Q96K37 410 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 SIRPDQ9H106 197 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
ATL3-203ENST00000538786 LINC00869P0C866 280 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 STAG3L2P0CL84 134 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 STAG3L3P0CL85 134 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
ATL3-203ENST00000538786 PDLIM4P50479 330 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 RHOBP62745 196 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 TVP23CQ96ET8 276 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 FBXL15Q9H469 300 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
ATL3-203ENST00000538786 PAX6P26367 422 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 OR10J1P30954 320 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 MINOS1Q5TGZ0 78 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 MINOS1-NBL1R4GNA1 71 aa11.86□□□□□ -0.51
ATL3-203ENST00000538786 TNCP24821 2201 aa11.85□□□□□ -0.51
ATL3-203ENST00000538786 PAGE4O60829 102 aa11.85□□□□□ -0.51
ATL3-203ENST00000538786 CXorf1O96002 111 aa11.85□□□□□ -0.51
ATL3-203ENST00000538786 MOSP00540 346 aa11.85□□□□□ -0.51
ATL3-203ENST00000538786 PRB1P04280 392 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms