RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CACFD1Q9UGQ2 172 aa13.64□□□□□ -0.23
CLN6-202ENST00000538696 TET2Q6N021 2002 aaPredicted RBP13.63□□□□□ -0.23
CLN6-202ENST00000538696 TNCP24821 2201 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 C2CD3Q4AC94 2353 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 RPL15P61313 204 aaKnown RBP13.63□□□□□ -0.23
CLN6-202ENST00000538696 BLCAPP62952 87 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 CLINT1Q14677 625 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 PRSS8Q16651 343 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 RASL11BQ9BPW5 248 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 COMMD5Q9GZQ3 224 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 NPFFR1Q9GZQ6 430 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 HEYLQ9NQ87 328 aaPredicted RBP13.63□□□□□ -0.23
CLN6-202ENST00000538696 FKBP11Q9NYL4 201 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 PAIP2BQ9ULR5 123 aaKnown RBP13.63□□□□□ -0.23
CLN6-202ENST00000538696 SIGLEC9Q9Y336 463 aa13.63□□□□□ -0.23
CLN6-202ENST00000538696 STRAPQ9Y3F4 350 aaKnown RBP13.63□□□□□ -0.23
CLN6-202ENST00000538696 NIPBLQ6KC79 2804 aaeCLIP13.62□□□□□ -0.23
CLN6-202ENST00000538696 CGB1A6NKQ9 187 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 IFNA7P01567 189 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 PLGLAQ15195 96 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 Q6ZS46 218 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 MMD2Q8IY49 270 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 STPG2Q8N412 459 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 OR1S2Q8NGQ3 325 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 OR5C1Q8NGR4 320 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 OR1L8Q8NGR8 309 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 OR5B3Q8NH48 314 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 ZNF702PQ9H963 129 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 PLEKHA3Q9HB20 300 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 ENY2Q9NPA8 101 aa13.62□□□□□ -0.23
CLN6-202ENST00000538696 SETD2Q9BYW2 2564 aaPredicted RBP13.61□□□□□ -0.23
CLN6-202ENST00000538696 A0A1B0GW64 132 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 E7EUB6 86 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 LY86O95711 162 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 HLA-DRB1P01911 266 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 TPT1P13693 172 aaKnown RBP13.61□□□□□ -0.23
CLN6-202ENST00000538696 ALKAL2Q6UX46 152 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 Q6ZSV7 163 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 TMEM170AQ8WVE7 144 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 HSPB9Q9BQS6 159 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 HIPK2Q9H2X6 1198 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 NDUFA4L2Q9NRX3 87 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 UBQLN2Q9UHD9 624 aa13.61□□□□□ -0.23
CLN6-202ENST00000538696 BORCS7-ASMTA0A0B4J1R7 106 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 FCN1O00602 326 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 CA2P00918 260 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 CRYBA1P05813 215 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 SSBP2P81877 361 aaPredicted RBP13.6□□□□□ -0.23
CLN6-202ENST00000538696 TNXAQ16473 311 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 C9orf152Q5JTZ5 239 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 OR8G2PQ6IF36 304 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 PPP1R27Q86WC6 154 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 BAP18Q8IXM2 172 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.6□□□□□ -0.23
CLN6-202ENST00000538696 OR10W1Q8NGF6 305 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 ATP5SQ99766 215 aa13.6□□□□□ -0.23
CLN6-202ENST00000538696 IGHV7-81A0A0B4J1V7 117 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 IFNA10P01566 189 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
CLN6-202ENST00000538696 GNB1P62873 340 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 NDPQ00604 133 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 SLC38A11Q08AI6 406 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 Q8N2B8 174 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 SCARB1Q8WTV0 552 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 PRSS22Q9GZN4 317 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 ARV1Q9H2C2 271 aa13.59□□□□□ -0.23
CLN6-202ENST00000538696 NF1P21359 2839 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 TSPAN9O75954 239 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 JTBO76095 146 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 NDUFA7O95182 113 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 OR8U8P0C7N1 319 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 NPY1RP25929 384 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 MAS1LP35410 378 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 EIF5AP63241 154 aaKnown RBP13.58□□□□□ -0.24
CLN6-202ENST00000538696 TMEM95Q3KNT9 176 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 FAM74A1Q5RGS3 127 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 UBAC2Q8NBM4 344 aa13.58□□□□□ -0.24
CLN6-202ENST00000538696 PCNPQ8WW12 178 aaKnown RBP13.58□□□□□ -0.24
CLN6-202ENST00000538696 A0A1W2PN81 502 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 LINC01548A6NM66 108 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 DFFBO76075 338 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 IGHG2P01859 326 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 CHRNA7P36544 502 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 HTR2BP41595 481 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
CLN6-202ENST00000538696 HBG1P69891 147 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 HBG2P69892 147 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 RPP30P78346 268 aaKnown RBP13.57□□□□□ -0.24
CLN6-202ENST00000538696 CX3CL1P78423 397 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 KRTAP24-1Q3LI83 254 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 LILRB2Q8N423 598 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 TMED6Q8WW62 240 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 PHYHIPLQ96FC7 376 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 GINS3Q9BRX5 216 aa13.57□□□□□ -0.24
CLN6-202ENST00000538696 RPS10-NUDT3A0A1W2PQS6 291 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 INS-IGF2F8WCM5 200 aa13.56□□□□□ -0.24
CLN6-202ENST00000538696 ACTL6BO94805 426 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms