RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 FLNCQ14315 2725 aa18.23■□□□□ 0.51
HMGA2-206ENST00000536545 USP9XQ93008 2570 aaPredicted RBP18.22■□□□□ 0.51
HMGA2-206ENST00000536545 CD69Q07108 199 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 TMEM144Q7Z5S9 345 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 VAX2Q9UIW0 290 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 TACC2O95359 2948 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 TIMM23O14925 209 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 SSMEM1Q8WWF3 244 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 BBC3Q96PG8 261 aaPredicted RBP18.22■□□□□ 0.51
HMGA2-206ENST00000536545 RNF5Q99942 180 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 BPESC1Q9GZL8 116 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 TMPRSS5Q9H3S3 457 aa18.22■□□□□ 0.51
HMGA2-206ENST00000536545 IGHV4-39P01824 125 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 MAS1LP35410 378 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 RPL29P47914 159 aaKnown RBP18.21■□□□□ 0.51
HMGA2-206ENST00000536545 B2MP61769 119 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 PRR20EP86478 221 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 PRR20CP86479 221 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 PRR20DP86480 221 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 PRR20BP86481 221 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 PRR20AP86496 221 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 HABP2Q14520 560 aaPredicted RBP18.21■□□□□ 0.51
HMGA2-206ENST00000536545 TMEM249Q2WGJ8 235 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 VMO1Q7Z5L0 202 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 STPG3Q8N7X2 389 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 CFHR4Q92496 578 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 P2RX4Q99571 388 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 ZFYVE26Q68DK2 2539 aa18.21■□□□□ 0.51
HMGA2-206ENST00000536545 NAV3Q8IVL0 2385 aa18.21■□□□□ 0.5
HMGA2-206ENST00000536545 IGLC7A0M8Q6 106 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 VENTXO95231 258 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 PRB1P04280 392 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 CEACAM3P40198 252 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 RAB31Q13636 194 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 GAMTQ14353 236 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 RBMS3Q6XE24 437 aaKnown RBP18.2■□□□□ 0.5
HMGA2-206ENST00000536545 SLC16A13Q7RTY0 426 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 SIRPDQ9H106 197 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 MANBALQ9NQG1 85 aa18.2■□□□□ 0.5
HMGA2-206ENST00000536545 METTL1Q9UBP6 276 aaKnown RBP18.2■□□□□ 0.5
HMGA2-206ENST00000536545 M0R036 132 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 HOXB4P17483 251 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 GPX4P36969 197 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 RPL27AP46776 148 aaKnown RBP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 COMPP49747 757 aaPredicted RBP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 LMO4P61968 165 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 FAM90A2PQ658T7 463 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 LHFPL4Q7Z7J7 247 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 RNASEH2CQ8TDP1 164 aaKnown RBP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 CACNG8Q8WXS5 425 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 IGKV1OR2-108A0A075B7D4 117 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 IGHV2-70DA0A0C4DH43 119 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 C7orf77A4D0Y5 90 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 TAGLN2P37802 199 aaKnown RBP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 CEBPGP53567 150 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 LCN2P80188 198 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 RHEBQ15382 184 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 C20orf24Q9BUV8 137 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 SLC45A2Q9UMX9 530 aa18.19■□□□□ 0.5
HMGA2-206ENST00000536545 PUS1Q9Y606 427 aaKnown RBP eCLIP18.19■□□□□ 0.5
HMGA2-206ENST00000536545 H3BQ15 152 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 SNRNP70P08621 437 aaKnown RBP18.18■□□□□ 0.5
HMGA2-206ENST00000536545 TNXAQ16473 311 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 AKIRIN2Q53H80 203 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 PVRIGQ6DKI7 326 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 PPP1R27Q86WC6 154 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 ZNF114Q8NC26 417 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 RPS10P5Q9NQ39 176 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 KLF2Q9Y5W3 355 aaPredicted RBP18.18■□□□□ 0.5
HMGA2-206ENST00000536545 AKAP6Q13023 2319 aa18.18■□□□□ 0.5
HMGA2-206ENST00000536545 COL12A1Q99715 3063 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 LINC00869P0C866 280 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SUB1P53999 127 aaKnown RBP eCLIP18.17■□□□□ 0.5
HMGA2-206ENST00000536545 CD81P60033 236 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 MEF2BQ02080 365 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-206ENST00000536545 MLANAQ16655 118 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 MRPL41Q8IXM3 137 aaKnown RBP18.17■□□□□ 0.5
HMGA2-206ENST00000536545 FBXL15Q9H469 300 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 HILPDAQ9Y5L2 63 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SPTAN1Q13813 2472 aaKnown RBP18.17■□□□□ 0.5
HMGA2-206ENST00000536545 A0A1W2PPV4 95 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 NDUFS6O75380 124 aaKnown RBP18.17■□□□□ 0.5
HMGA2-206ENST00000536545 AKR1C3P42330 323 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 PSMB3P49720 205 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SSBP2P81877 361 aaPredicted RBP18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SLC35E3Q7Z769 313 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 GATAD1Q8WUU5 269 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SLC35E1Q96K37 410 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SPOCK3Q9BQ16 436 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 SMCO4Q9NRQ5 59 aa18.17■□□□□ 0.5
HMGA2-206ENST00000536545 ACTL6BO94805 426 aa18.16■□□□□ 0.5
HMGA2-206ENST00000536545 PDLIM4P50479 330 aa18.16■□□□□ 0.5
HMGA2-206ENST00000536545 CCL19Q99731 98 aa18.16■□□□□ 0.5
HMGA2-206ENST00000536545 FNDC4Q9H6D8 234 aaPredicted RBP18.16■□□□□ 0.5
HMGA2-206ENST00000536545 TEX22C9J3V5 150 aa18.15■□□□□ 0.5
HMGA2-206ENST00000536545 REG1AP05451 166 aa18.15■□□□□ 0.5
HMGA2-206ENST00000536545 STAG3L2P0CL84 134 aa18.15■□□□□ 0.5
HMGA2-206ENST00000536545 STAG3L3P0CL85 134 aa18.15■□□□□ 0.5
HMGA2-206ENST00000536545 NIPSNAP3BQ9BS92 247 aa18.15■□□□□ 0.5
HMGA2-206ENST00000536545 PLXNB1O43157 2135 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms