RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 NDUFA6P56556 154 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 KLF3P57682 345 aaPredicted RBP4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GNB1P62873 340 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPL39P5Q59GN2 51 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GCSAMLQ5JQS6 135 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GFI1BQ5VTD9 330 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MOGAT3Q86VF5 341 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LURAP1LQ8IV03 231 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPRMLQ8N4K4 120 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZADH2Q8N4Q0 377 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RBMXL3Q8N7X1 1067 aaKnown RBP4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF383Q8NA42 475 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NUP37Q8NFH4 326 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR10A7Q8NGE5 316 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF596Q8TC21 504 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RNASEH2CQ8TDP1 164 aaKnown RBP4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ITLN1Q8WWA0 313 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NEUROG1Q92886 237 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ADTRPQ96IZ2 230 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IMMP2LQ96T52 175 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 TXNDC17Q9BRA2 123 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SFXN3Q9BWM7 321 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 NIT2Q9NQR4 276 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 KCNIP2Q9NS61 270 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GAR1Q9NY12 217 aaKnown RBP4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IDI2-AS1Q9NZ38 188 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 MIOXQ9UGB7 285 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IL19Q9UHD0 177 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 URGCP-MRPS24S4R325 110 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DYSFO75923 2080 aa4.79□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CNOT1A5YKK6 2376 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 IGHV3OR15-7A0A075B7D8 119 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SAA2-SAA4A0A096LPE2 208 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 A8MXE2 369 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 F6UZH7 168 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PDE6DO43924 150 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HRASP01112 189 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GYPAP02724 150 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LINC00869P0C866 280 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SAA2P0DJI9 122 aaPredicted RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 AREGP15514 252 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H1BP16401 226 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPL29P47914 159 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF83P51522 516 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 CEBPGP53567 150 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HSPE1P61604 102 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPS16P62249 146 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPP30P78346 268 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 EDDM3AQ14507 147 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SPINK9Q5DT21 86 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ACTL10Q5JWF8 245 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PRAMEF5Q5TYX0 476 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR4A47Q6IF82 309 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SLC25A48Q6ZT89 311 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 LINC01551Q86U37 167 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PNKDQ8N490 385 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNRF1Q8ND25 227 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR4F5Q8NH21 305 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR4S2Q8NH73 311 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 FAM57AQ8TBR7 257 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 DAZAP1Q96EP5 407 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 OR4F4Q96R69 305 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 S1PR3Q99500 378 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 HIST1H2BLQ99880 126 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ELOVL1Q9BW60 279 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GPR61Q9BZJ8 451 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RAB9BQ9NP90 201 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 GNG12Q9UBI6 72 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 RPUSD1Q9UJJ7 312 aaKnown RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 PITPNC1Q9UKF7 332 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ZNF257Q9Y2Q1 563 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 ARL2-SNX15V9GYD0 113 aa4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 EP300Q09472 2414 aaPredicted RBP4.78□□□□□ -1.64
TNFRSF1A-206ENST00000535038 SVILO95425 2214 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 BSNQ9UPA5 3926 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 ZFHX4Q86UP3 3567 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 TRBV20OR9-2A0A075B6H5 130 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 TRAV38-1A0A0B4J264 116 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 C11orf94C9JXX5 98 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 H7BYZ3 331 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 K7EM74 188 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 UPK2O00526 184 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 HMGB3O15347 200 aaKnown RBP4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 MMP23AO75900 390 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 CRYAAP02489 173 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 CT45A6P0DMU7 189 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 CT45A5P0DMU8 189 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 CT45A7P0DMV0 189 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 DEFA4P12838 97 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 PPIFP30405 207 aaKnown RBP4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 GALR1P47211 349 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 ATP5G3P48201 142 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 TDGF1P3P51864 188 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 LCN2P80188 198 aa4.77□□□□□ -1.65
TNFRSF1A-206ENST00000535038 MRPS11P82912 194 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms