RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TAS2R46P59540 309 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 SLAQ13239 276 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 SLC38A6Q8IZM9 456 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 STXBP6Q8NFX7 210 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR11H4Q8NGC9 324 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR4D5Q8NGN0 318 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR5H2Q8NGV7 314 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 SCARB1Q8WTV0 552 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 C15orf40Q8WUR7 153 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 SECTM1Q8WVN6 248 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 ISOC1Q96CN7 298 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF479Q96JC4 524 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 CLCC1Q96S66 551 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR51J1Q9H342 316 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 PARP11Q9NR21 331 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 EHFQ9NZC4 300 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 METTL1Q9UBP6 276 aaKnown RBP4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 ANAPC10Q9UM13 185 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 RBMX2Q9Y388 322 aaKnown RBP4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 PRELID3BQ9Y3B1 194 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 WSB1Q9Y6I7 421 aa4.52□□□□□ -1.69
HMGB1P42-201ENST00000532126 TRAV41A0A0B4J266 112 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 CCDC160A6NGH7 325 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 H3BMQ9 156 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 SULT1C2O00338 296 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 FCN1O00602 326 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 ATP6V0E1O15342 81 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 TNFSF12O43508 249 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 CRYZL1O95825 349 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 CA2P00918 260 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 IGLV2-14P01704 120 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 IGHG4P01861 327 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 HLA-DMAP28067 261 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 RCVRNP35243 200 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 HRH1P35367 487 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 RFX2P48378 723 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 FXYD4P59646 89 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 HERV-K104P61576 105 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 FOXE3Q13461 319 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 MSMO1Q15800 293 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR2B11Q5JQS5 317 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 XP32Q5T750 250 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 DHRS11Q6UWP2 260 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF562Q6V9R5 426 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF66Q6ZN08 573 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 PPP1R27Q86WC6 154 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 TMEM17Q86X19 198 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 C1QL4Q86Z23 238 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR6F1Q8NGZ6 308 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 DYNC2LI1Q8TCX1 351 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 TCTEX1D2Q8WW35 142 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 DDB2Q92466 427 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 BORCS5Q969J3 196 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 HSD17B10Q99714 261 aaKnown RBP4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF2Q9BSG1 426 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 DCUN1D5Q9BTE7 237 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 C6orf62Q9GZU0 229 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 BATF3Q9NR55 127 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 CCL28Q9NRJ3 127 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZFP57Q9NU63 452 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 TAS2R8Q9NYW2 309 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 CCDC59Q9P031 241 aaKnown RBP4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF580Q9UK33 172 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 CBY1Q9Y3M2 126 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 FBN3Q75N90 2809 aa4.51□□□□□ -1.69
HMGB1P42-201ENST00000532126 G3V318 75 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 CNIH1O95406 144 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 IGLV2-23P01705 113 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 SLC6A1P30531 599 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 UBE2KP61086 200 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 TSPAN5P62079 268 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 GNB1P62873 340 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 RPL30P62888 115 aaKnown RBP4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 NDPQ00604 133 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 TMEM267Q0VDI3 215 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 EIF4EBP1Q13541 118 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 FXYD3Q14802 87 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 ECSCRQ19T08 205 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 ACTBL2Q562R1 376 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 ZNF695Q8IW36 515 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 TCTEX1D1Q8N7M0 179 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 KLHL30-AS1Q8NEE0 82 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 OR4S2Q8NH73 311 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 MCFD2Q8NI22 146 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 GRPEL2Q8TAA5 225 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 FCAMRQ8WWV6 532 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 ARPC1AQ92747 370 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 UHRF2Q96PU4 802 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 SLIRPQ9GZT3 109 aaKnown RBP4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 MIXL1Q9H2W2 232 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 MAP6D1Q9H9H5 199 aa4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
HMGB1P42-201ENST00000532126 TRAV6A0A075B6T7 132 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 CREBL2O60519 120 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 GAGE7O76087 117 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 IFNA6P05013 189 aa4.49□□□□□ -1.69
HMGB1P42-201ENST00000532126 GAGE12FP0CL80 117 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms