RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF414Q96IQ9 312 aa6.54□□□□□ -1.36
USF1-210ENST00000531842 HINT2Q9BX68 163 aa6.54□□□□□ -1.36
USF1-210ENST00000531842 BET1LQ9NYM9 111 aa6.54□□□□□ -1.36
USF1-210ENST00000531842 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
USF1-210ENST00000531842 MRPL27Q9P0M9 148 aaKnown RBP6.54□□□□□ -1.36
USF1-210ENST00000531842 COMMD3Q9UBI1 195 aa6.54□□□□□ -1.36
USF1-210ENST00000531842 NACAE9PAV3 2078 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 TRAV25A0A0B4J276 109 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 UPK2O00526 184 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 TSPAN4O14817 238 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 HPGDSO60760 199 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 HPRT1P00492 218 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 PPYP01298 95 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 RBMY1A1P0DJD3 496 aaKnown RBP6.53□□□□□ -1.36
USF1-210ENST00000531842 RBMY1CP0DJD4 496 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 NQO2P16083 231 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 PTBP1P26599 531 aaKnown RBP eCLIP6.53□□□□□ -1.36
USF1-210ENST00000531842 RFX2P48378 723 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 HERV-K104P61576 105 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 ERVK-16P61578 105 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 RBMY1FQ15415 496 aaKnown RBP6.53□□□□□ -1.36
USF1-210ENST00000531842 MSMO1Q15800 293 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 AADACL3Q5VUY0 350 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 GPR107Q5VW38 600 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 LAMTOR1Q6IAA8 161 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 DHRS11Q6UWP2 260 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 Q6ZTC4 211 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 TMEM17Q86X19 198 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 CROCCP3Q8IVE0 287 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 GBGT1Q8N5D6 347 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 OR5AP2Q8NGF4 316 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 OR51H1Q8NH63 302 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 ZNF502Q8TBZ5 544 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 GPX8Q8TED1 209 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 S100A16Q96FQ6 103 aaKnown RBP6.53□□□□□ -1.36
USF1-210ENST00000531842 SPAG8Q99932 426 aaPredicted RBP6.53□□□□□ -1.36
USF1-210ENST00000531842 C20orf24Q9BUV8 137 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 QTRT1Q9BXR0 403 aaKnown RBP6.53□□□□□ -1.36
USF1-210ENST00000531842 CSTL1Q9H114 145 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 MIXL1Q9H2W2 232 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 C5orf66Q9H5L9 145 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 VCX3AQ9NNX9 186 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 DIABLOQ9NR28 239 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 TMEM140Q9NV12 185 aa6.53□□□□□ -1.36
USF1-210ENST00000531842 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 OR2T8A6NH00 312 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 RBFOX2O43251 390 aaKnown RBP eCLIP6.52□□□□□ -1.37
USF1-210ENST00000531842 PMP2P02689 132 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 TRAPPC2P0DI81 140 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 TRAPPC2BP0DI82 140 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 OR13C7P0DN81 318 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 HLA-DMBP28068 263 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 GNRHRP30968 328 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 ELLP55199 621 aaPredicted RBP6.52□□□□□ -1.37
USF1-210ENST00000531842 TMEM69Q5SWH9 247 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 LINC00336Q6ZUF6 198 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 UBAC2Q8NBM4 344 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 OR10W1Q8NGF6 305 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 GIMAP1Q8WWP7 306 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 TMEM190Q8WZ59 177 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 GALNT14Q96FL9 552 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 SRSF8Q9BRL6 282 aaKnown RBP6.52□□□□□ -1.37
USF1-210ENST00000531842 MRPS26Q9BYN8 205 aaKnown RBP6.52□□□□□ -1.37
USF1-210ENST00000531842 C11orf68Q9H3H3 251 aaKnown RBP6.52□□□□□ -1.37
USF1-210ENST00000531842 IFT46Q9NQC8 304 aa6.52□□□□□ -1.37
USF1-210ENST00000531842 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 MPTX1A8MV57 137 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 CTDSP2O14595 271 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 TGOLN2O43493 480 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 SNAPC5O75971 98 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 CA1P00915 261 aaPredicted RBP6.51□□□□□ -1.37
USF1-210ENST00000531842 APOA1P02647 267 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 CBX5P45973 191 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 KLK9Q2XQG4 91 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 Q56UQ5 140 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 FAM24BQ8N5W8 94 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 GDPD1Q8N9F7 314 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 Q8NAQ8 132 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 OR1L8Q8NGR8 309 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 BORCS5Q969J3 196 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 BSCL2Q96G97 398 aaPredicted RBP6.51□□□□□ -1.37
USF1-210ENST00000531842 CMTM3Q96MX0 182 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 ABHD1Q96SE0 405 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 RNF2Q99496 336 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 ZNF436Q9C0F3 470 aaPredicted RBP6.51□□□□□ -1.37
USF1-210ENST00000531842 MFFQ9GZY8 342 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 FXYD6Q9H0Q3 95 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 PLEKHA2Q9HB19 425 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 DAZ1Q9NQZ3 744 aaKnown RBP6.51□□□□□ -1.37
USF1-210ENST00000531842 KLK9Q9UKQ9 250 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 CELA1Q9UNI1 258 aa6.51□□□□□ -1.37
USF1-210ENST00000531842 OR51B2Q9Y5P1 312 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms