RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 SSX2Q16385 188 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 CLEC12BQ2HXU8 276 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 TMEM144Q7Z5S9 345 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 MRPL41Q8IXM3 137 aaKnown RBP8.71□□□□□ -1.02
SRPRA-205ENST00000531104 LRRC75A-AS1Q8N1F1 130 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 RPP25LQ8N5L8 163 aaKnown RBP8.71□□□□□ -1.02
SRPRA-205ENST00000531104 RNASEH2CQ8TDP1 164 aaKnown RBP8.71□□□□□ -1.02
SRPRA-205ENST00000531104 CACNG8Q8WXS5 425 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 RCC1LQ96I51 464 aaKnown RBP8.71□□□□□ -1.02
SRPRA-205ENST00000531104 P2RX4Q99571 388 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 GGTLC1Q9BX51 225 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 KIAA1456Q9P272 454 aa8.71□□□□□ -1.02
SRPRA-205ENST00000531104 KMT2BQ9UMN6 2715 aaPredicted RBP8.71□□□□□ -1.02
SRPRA-205ENST00000531104 SEC14L6B5MCN3 397 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 C9JQL5 133 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 J3QKU1 62 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 YIF1AO95070 293 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 CRYGCP07315 174 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 OR13C7P0DN81 318 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 COL8A1P27658 744 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 SAA4P35542 130 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 SUB1P53999 127 aaKnown RBP eCLIP8.7□□□□□ -1.02
SRPRA-205ENST00000531104 RAB2AP61019 212 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 TNXAQ16473 311 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 GUK1Q16774 197 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 FFAR4Q5NUL3 377 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 ZNF709Q8N972 641 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 SMDT1Q9H4I9 107 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 CARHSP1Q9Y2V2 147 aaKnown RBP8.7□□□□□ -1.02
SRPRA-205ENST00000531104 FAM96BQ9Y3D0 163 aa8.7□□□□□ -1.02
SRPRA-205ENST00000531104 IGHV1-69DA0A0B4J2H0 117 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 AGPAT2O15120 278 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 IGHV1-69P01742 117 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 MSMBP08118 114 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 ADCYAP1P18509 176 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 M6PRP20645 277 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PAX6P26367 422 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 RPL29P47914 159 aaKnown RBP8.69□□□□□ -1.02
SRPRA-205ENST00000531104 MFAP2P55001 183 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 ELLP55199 621 aaPredicted RBP8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PRR20EP86478 221 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PRR20CP86479 221 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PRR20DP86480 221 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PRR20BP86481 221 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PRR20AP86496 221 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 AKR1C1Q04828 323 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 GAMTQ14353 236 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 PEA15Q15121 130 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 MMDQ15546 238 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 C5orf64Q2M2E5 130 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 ACOT6Q3I5F7 207 aaPredicted RBP8.69□□□□□ -1.02
SRPRA-205ENST00000531104 TEPPQ6URK8 271 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 SFT2D1Q8WV19 159 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 SRSF12Q8WXF0 261 aaKnown RBP8.69□□□□□ -1.02
SRPRA-205ENST00000531104 FNDC4Q9H6D8 234 aaPredicted RBP8.69□□□□□ -1.02
SRPRA-205ENST00000531104 TMEM231Q9H6L2 316 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 TREM1Q9NP99 234 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 KCNIP2Q9NS61 270 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 SLC45A2Q9UMX9 530 aa8.69□□□□□ -1.02
SRPRA-205ENST00000531104 ZFYVE26Q68DK2 2539 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 IGKV1OR2-108A0A075B7D4 117 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 CTXND1A0A1B0GTU2 59 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 B4DSR2 109 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 ACTL6BO94805 426 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 LINC00869P0C866 280 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 AREGP15514 252 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 CD24P25063 80 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 MLANAQ16655 118 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 DEFB113Q30KQ7 82 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 ZNF506Q5JVG8 444 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 SLC16A13Q7RTY0 426 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 OR10G4Q8NGN3 311 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 OR10G9Q8NGN4 311 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 OR10G7Q8NGN6 311 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 OR1P1Q8NH06 330 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 MBD6Q96DN6 1003 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 PSMG3-AS1Q96PY0 264 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 PBDC1Q9BVG4 233 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 SEC11CQ9BY50 192 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 MEGF9Q9H1U4 602 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 F11RQ9Y624 299 aaKnown RBP8.68□□□□□ -1.02
SRPRA-205ENST00000531104 PXMP4Q9Y6I8 212 aa8.68□□□□□ -1.02
SRPRA-205ENST00000531104 TRAV20A0A0B4J274 112 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 CYB5BO43169 146 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 FAM106CPP0CH98 169 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 TMEM11P17152 192 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 GATA3P23771 443 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 TNCP24821 2201 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 BRS3P32247 399 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 LOXL1Q08397 574 aaPredicted RBP8.67□□□□□ -1.02
SRPRA-205ENST00000531104 RAB31Q13636 194 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 HNF4GQ14541 408 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 FAM120AOSQ5T036 256 aa8.67□□□□□ -1.02
SRPRA-205ENST00000531104 MIC13Q5XKP0 118 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms