RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 GNRHRP30968 328 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 CATR1Q13166 79 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 AADACL3Q5VUY0 350 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 SFXN4Q6P4A7 337 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 LILRB2Q8N423 598 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 CNBD2Q96M20 576 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 C11orf68Q9H3H3 251 aaKnown RBP9.7□□□□□ -0.86
HIF3A-214ENST00000531043 RNF167Q9H6Y7 350 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
HIF3A-214ENST00000531043 IFNA4P05014 189 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 G6PCP35575 357 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 LEMD1Q68G75 181 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 FAM24BQ8N5W8 94 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 TMEM116Q8NCL8 245 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 C2CD4CQ8TF44 421 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 FCAMRQ8WWV6 532 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 LSM10Q969L4 123 aaKnown RBP9.69□□□□□ -0.86
HIF3A-214ENST00000531043 COMMD9Q9P000 198 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 OR51B2Q9Y5P1 312 aa9.69□□□□□ -0.86
HIF3A-214ENST00000531043 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 IGLL5B9A064 214 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 NUPL2O15504 423 aaKnown RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 PGLYRP1O75594 196 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 SCGNO76038 276 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 YIF1AO95070 293 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 CA1P00915 261 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 KRASP01116 189 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 APOHP02749 345 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 RLN1P04808 185 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 FGF2P09038 288 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 FGF9P31371 208 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 SDC2P34741 201 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 LPAR6P43657 344 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 MXD1Q05195 221 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 THOC7Q6I9Y2 204 aaKnown RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 GIMAP1Q8WWP7 306 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 OR10C1Q96KK4 312 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 C6orf62Q9GZU0 229 aaPredicted RBP9.68□□□□□ -0.86
HIF3A-214ENST00000531043 MFFQ9GZY8 342 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 AUNIPQ9H7T9 357 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
HIF3A-214ENST00000531043 IGHV3-66A0A0C4DH42 116 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 I3L2K1 104 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 RBMY1A1P0DJD3 496 aaKnown RBP9.67□□□□□ -0.86
HIF3A-214ENST00000531043 RBMY1CP0DJD4 496 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 ERVK-16P61578 105 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 RBMY1FQ15415 496 aaKnown RBP9.67□□□□□ -0.86
HIF3A-214ENST00000531043 TCF24Q7RTU0 167 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 HSD17B13Q7Z5P4 300 aaPredicted RBP9.67□□□□□ -0.86
HIF3A-214ENST00000531043 Q8NAQ8 132 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 ST8SIA2Q92186 375 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 SLC25A46Q96AG3 418 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 ATP6V0BQ99437 205 aa9.67□□□□□ -0.86
HIF3A-214ENST00000531043 CYB5BO43169 146 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 XRCC3O43542 346 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 F2RP25116 425 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 PSMB9P28065 219 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 RFX2P48378 723 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 DEFB131AP59861 70 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 UBE2UQ5VVX9 321 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 TPRA1Q86W33 373 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 OR5AP2Q8NGF4 316 aa9.66□□□□□ -0.86
HIF3A-214ENST00000531043 NXF2Q9GZY0 626 aaKnown RBP9.66□□□□□ -0.86
HIF3A-214ENST00000531043 TRAV14DV4A0A0A6YYC5 116 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 A0A1B0GVY2 172 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 HERV-K104P61576 105 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 TMEM187Q14656 261 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 IZUMO2Q6UXV1 221 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 SPARTQ8N0X7 666 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 OR1P1Q8NH06 330 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 MOB3AQ96BX8 217 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 DGCR14Q96DF8 476 aaKnown RBP9.65□□□□□ -0.86
HIF3A-214ENST00000531043 FXYD6Q9H0Q3 95 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 TMEM14BQ9NUH8 114 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 EHFQ9NZC4 300 aa9.65□□□□□ -0.86
HIF3A-214ENST00000531043 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 MRPS14O60783 128 aaKnown RBP9.64□□□□□ -0.87
HIF3A-214ENST00000531043 SNAPC5O75971 98 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 DFFBO76075 338 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 MT-CO2P00403 227 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 PMP2P02689 132 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 MFAP4P55083 255 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-214ENST00000531043 RELQ04864 619 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-214ENST00000531043 DHRS11Q6UWP2 260 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 TOMM20LQ6UXN7 152 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 ZNF2Q9BSG1 426 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-214ENST00000531043 BLOC1S6Q9UL45 172 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 SSR3Q9UNL2 185 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 ABCA13Q86UQ4 5058 aa9.64□□□□□ -0.87
HIF3A-214ENST00000531043 C15orf61A6NNL5 157 aa9.63□□□□□ -0.87
HIF3A-214ENST00000531043 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
HIF3A-214ENST00000531043 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
HIF3A-214ENST00000531043 C4BPBP20851 252 aa9.63□□□□□ -0.87
HIF3A-214ENST00000531043 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
HIF3A-214ENST00000531043 PHLDA2Q53GA4 152 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms