RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 STHQ8IWL8 128 aa11.59□□□□□ -0.55
CHMP4A-203ENST00000527154 J3QRK9 145 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 NUPL2O15504 423 aaKnown RBP11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 IFNA21P01568 189 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 IFNA17P01571 189 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 OR13C7P0DN81 318 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 RANBP1P43487 201 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 RCN1Q15293 331 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 SLC25A24Q6NUK1 477 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 ZNF767PQ75MW2 155 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 GPHA2Q96T91 129 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 COMMD5Q9GZQ3 224 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 NXF2Q9GZY0 626 aaKnown RBP11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 HRASLSQ9HDD0 168 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 NDUFA4L2Q9NRX3 87 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 TMEM14BQ9NUH8 114 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 TAS2R8Q9NYW2 309 aa11.58□□□□□ -0.56
CHMP4A-203ENST00000527154 IGHV3-49A0A0A0MS15 119 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 ARL6IP5O75915 188 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 HSMCR30P0CW71 290 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 CADM3Q8N126 398 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 ST8SIA2Q92186 375 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 DCSTAMPQ9H295 470 aa11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 ELF5Q9UKW6 265 aaPredicted RBP11.57□□□□□ -0.56
CHMP4A-203ENST00000527154 TEX50A0A1B0GTY4 177 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 HPRT1P00492 218 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 TRAPPC2P0DI81 140 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 TRAPPC2BP0DI82 140 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 NQO2P16083 231 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 RAB6AP20340 208 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 GADD45AP24522 165 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 RPS25P62851 125 aaKnown RBP11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 CNIH2Q6PI25 160 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 SPAG16Q8N0X2 631 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 DUSP18Q8NEJ0 188 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 TXN2Q99757 166 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 TMEM140Q9NV12 185 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 SCN3BQ9NY72 215 aa11.56□□□□□ -0.56
CHMP4A-203ENST00000527154 IGHV3OR16-13A0A075B7E8 117 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 IGHV3-74A0A0B4J1X5 117 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 I3L2K1 104 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 K7EQG2 157 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 NPY1RP25929 384 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 CALRP27797 417 aaKnown RBP11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 TRAM1Q15629 374 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 Q56UQ5 140 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 OGFRL1Q5TC84 451 aaPredicted RBP11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 UBE2DNLQ8IWF7 75 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 LSM10Q969L4 123 aaKnown RBP11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 V9GY05 133 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 UBR4Q5T4S7 5183 aa11.55□□□□□ -0.56
CHMP4A-203ENST00000527154 APOHP02749 345 aaPredicted RBP11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 PSMA1P25786 263 aaKnown RBP11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 TALDO1P37837 337 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 ARL6IP1Q15041 203 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 HES5Q5TA89 166 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 OR1L8Q8NGR8 309 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 NEU1Q99519 415 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 VCXQ9H320 206 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 ZFAND3Q9H8U3 227 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
CHMP4A-203ENST00000527154 A0A075B6Q4 140 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 CASQ2O14958 399 aaPredicted RBP11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 FABP5Q01469 135 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 OR1P1Q8NH06 330 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 DCANP1Q8TF63 244 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 COMMD9Q9P000 198 aa11.53□□□□□ -0.56
CHMP4A-203ENST00000527154 DNASE2O00115 360 aaPredicted RBP11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 ST8SIA3O43173 380 aa11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 YIF1AO95070 293 aa11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 UBE2UQ5VVX9 321 aa11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 HACD4Q5VWC8 232 aa11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 GINS3Q9BRX5 216 aa11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF705FA8MVS1 300 aaPredicted RBP11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 TNFSF12O43508 249 aa11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF705DP0CH99 300 aaPredicted RBP11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF705BP0CI00 300 aaPredicted RBP11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 MFAP4P55083 255 aa11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 MLLT11Q13015 90 aaPredicted RBP11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 C6orf223Q8N319 242 aa11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 RNF167Q9H6Y7 350 aa11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 ANXA10Q9UJ72 324 aa11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
CHMP4A-203ENST00000527154 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 SULT1C2O00338 296 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 SPART-AS1P0CW21 52 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 OXA1LQ15070 435 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 ZNF114Q8NC26 417 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 CCDC90BQ9GZT6 254 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 ACOT13Q9NPJ3 140 aa11.5□□□□□ -0.57
CHMP4A-203ENST00000527154 METTL21EPA6NDL7 271 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms