RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 AKAP14Q86UN6 197 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.14□□□□□ -1.91
ATM-208ENST00000525537 OR4C16Q8NGL9 310 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 SLC25A40Q8TBP6 338 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 TVP23CQ96ET8 276 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 C2orf50Q96LR7 162 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 BIN3Q9NQY0 253 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 PRNDQ9UKY0 176 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 ZSWIM8A7E2V4 1837 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 KIF1BO60333 1816 aa3.14□□□□□ -1.91
ATM-208ENST00000525537 COL1A2P08123 1366 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 IGLV10-54A0A075B6I4 117 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 IRGMA1A4Y4 181 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 SIGLEC16A6NMB1 481 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 CTSGP08311 255 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 SMIM17P0DL12 118 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 TCTAP57738 103 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 LHFPL1Q86WI0 220 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 ZHX1-C8orf76Q96EF9 292 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 IMMP2LQ96T52 175 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 PTPRSQ13332 1948 aa3.13□□□□□ -1.91
ATM-208ENST00000525537 SYNMO15061 1565 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 MIA2Q96PC5 1412 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 TRAV4A0A0B4J268 109 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 A0A1B0GV72 72 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 ODF3BA8MYP8 253 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 PPP5D1E7EU14 171 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 CREBL2O60519 120 aaPredicted RBP3.12□□□□□ -1.91
ATM-208ENST00000525537 IGHV3-7P01780 117 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 BPGMP07738 259 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 LGALS1P09382 135 aaKnown RBP3.12□□□□□ -1.91
ATM-208ENST00000525537 IFI30P13284 250 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 SPI1P17947 270 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 G6PCP35575 357 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 DEFA3P59666 94 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 TSNQ15631 228 aaKnown RBP3.12□□□□□ -1.91
ATM-208ENST00000525537 AKR1C8PQ5T2L2 129 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 ZNF767PQ75MW2 155 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 LYPD1Q8N2G4 141 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 LINC00304Q8N9R0 145 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 RASSF5Q8WWW0 418 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 PSORS1C2Q9UIG4 136 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 TIMM22Q9Y584 194 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 SCN9AQ15858 1988 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 NACADO15069 1562 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 SLX4Q8IY92 1834 aa3.12□□□□□ -1.91
ATM-208ENST00000525537 TRBV19A0A075B6N1 114 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 A0A1W2PNU3 283 aaPredicted RBP3.11□□□□□ -1.91
ATM-208ENST00000525537 G3V2T6 193 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 MSNP26038 577 aaKnown RBP3.11□□□□□ -1.91
ATM-208ENST00000525537 PSMB8P28062 276 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 SERPINB1P30740 379 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 CCR2P41597 374 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 RPL28P46779 137 aaKnown RBP3.11□□□□□ -1.91
ATM-208ENST00000525537 GABRA4P48169 554 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 NCALDP61601 193 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 FOXF1Q12946 379 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 SPANXN3Q5MJ09 141 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 GRINAQ7Z429 371 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 DYNAPQ8N1N2 210 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 SH3BGRL3Q9H299 93 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 RNF122Q9H9V4 155 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 LYRM2Q9NU23 88 aaPredicted RBP3.11□□□□□ -1.91
ATM-208ENST00000525537 SS18L2Q9UHA2 77 aa3.11□□□□□ -1.91
ATM-208ENST00000525537 MYO16Q9Y6X6 1858 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 TRAV38-1A0A0B4J264 116 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 H3BT86 120 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 MFSD11O43934 449 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 OR2J2O76002 312 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 MSMBP08118 114 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 IDO1P14902 403 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 PHBP35232 272 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 ATP5G3P48201 142 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 EVX1P49640 407 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 ZNF80P51504 273 aaPredicted RBP3.1□□□□□ -1.91
ATM-208ENST00000525537 TPI1P60174 286 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 GNG5P63218 68 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 Q6ZS52 159 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 STX19Q8N4C7 294 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 NAT8Q9UHE5 227 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 ANKRD30AQ9BXX3 1397 aa3.1□□□□□ -1.91
ATM-208ENST00000525537 ZNF106Q9H2Y7 1883 aaKnown RBP3.09□□□□□ -1.91
ATM-208ENST00000525537 MYH3P11055 1940 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 PLXND1Q9Y4D7 1925 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 ARHGAP32A7KAX9 2087 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 IGKV1D-17A0A075B6S4 117 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 TRAV41A0A0B4J266 112 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 CLDN25C9JDP6 229 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 H3BQV1 296 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 BUB1B-PAK6H3BSN5 160 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 NDUFC2O95298 119 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 IGKV1-17P01599 117 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 CASP1P29466 404 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 RHOBP62745 196 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 TFAMQ00059 246 aaKnown RBP3.09□□□□□ -1.91
ATM-208ENST00000525537 LYZL1Q6UWQ5 148 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 TCF24Q7RTU0 167 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 TAC4Q86UU9 113 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 DDA1Q9BW61 102 aa3.09□□□□□ -1.91
ATM-208ENST00000525537 MED29Q9NX70 200 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms