RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 PDCD10Q9BUL8 212 aa13.18□□□□□ -0.3
TSPAN4-214ENST00000525201 NXF2Q9GZY0 626 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-214ENST00000525201 ZC4H2Q9NQZ6 224 aa13.18□□□□□ -0.3
TSPAN4-214ENST00000525201 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
TSPAN4-214ENST00000525201 S4R3C0 116 aa13.18□□□□□ -0.3
TSPAN4-214ENST00000525201 COL7A1Q02388 2944 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 DISC1C4P0D8 188 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 C3orf84H3BNL1 204 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 TGOLN2O43493 480 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 CD74P04233 296 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 IL18Q14116 193 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 GUCA2BQ16661 112 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 CNPY1Q3B7I2 92 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 SCGB2B2Q4G0G5 96 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 ZNF57Q68EA5 555 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 SMIM4Q8WVI0 70 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 MRGPRFQ96AM1 343 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 SPATA25Q9BR10 227 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 THAP7Q9BT49 309 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 PLEKHA3Q9HB20 300 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 C21orf62Q9NYP8 219 aa13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 C14orf166Q9Y224 244 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-214ENST00000525201 C3orf85A0A1B0GTC6 90 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 CTDSPLO15194 276 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 PPP5CP53041 499 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 ERHP84090 104 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 PRCDQ00LT1 54 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 SURF2Q15527 256 aaPredicted RBP13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 TRIM16LQ309B1 348 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 RNASE11Q8TAA1 199 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 DIRAS2Q96HU8 199 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 NEURL2Q9BR09 285 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 TM2D3Q9BRN9 247 aa13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 MRPL27Q9P0M9 148 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-214ENST00000525201 TRAV25A0A0B4J276 109 aa13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 TMEM213A2RRL7 107 aa13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 HSPE1P61604 102 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 ZNF114Q8NC26 417 aa13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 RRNAD1Q96FB5 475 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 ZNF436Q9C0F3 470 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 C6orf62Q9GZU0 229 aaPredicted RBP13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 MIXL1Q9H2W2 232 aa13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-214ENST00000525201 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 NDUFA4O00483 81 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 CTSDP07339 412 aaPredicted RBP13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 Q56UQ5 140 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 UXS1Q8NBZ7 420 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 TMEM190Q8WZ59 177 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 TXN2Q99757 166 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 PRRT1Q99946 306 aa13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 KMT2CQ8NEZ4 4911 aaKnown RBP13.14□□□□□ -0.31
TSPAN4-214ENST00000525201 OR2T8A6NH00 312 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 CORTO00230 105 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 CTDSP2O14595 271 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 SCGB2A1O75556 95 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 SNCAP37840 140 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 ADAMTSL5Q6ZMM2 481 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 OR2C3Q8N628 320 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 UBAC2Q8NBM4 344 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 OR13C8Q8NGS7 320 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 SCARB1Q8WTV0 552 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 SCGB3A2Q96PL1 93 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 CACFD1Q9UGQ2 172 aa13.13□□□□□ -0.31
TSPAN4-214ENST00000525201 IFNA17P01571 189 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 PI3P19957 117 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 SUB1P53999 127 aaKnown RBP eCLIP13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 MFAP4P55083 255 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 LAMTOR1Q6IAA8 161 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 OR52B4Q8NGK2 314 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 MCFD2Q8NI22 146 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 CACNG8Q8WXS5 425 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
TSPAN4-214ENST00000525201 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 TEX13DA0A0J9YY54 714 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 OR11H12B2RN74 326 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 INS-IGF2F8WCM5 200 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 K7EIM0 57 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 UCP1P25874 307 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 BMI1P35226 326 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 DHODHQ02127 395 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 UNQ9165/PRO28630Q6UXU0 137 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 MUC7Q8TAX7 377 aa13.11□□□□□ -0.31
TSPAN4-214ENST00000525201 MARCH1Q8TCQ1 289 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms