RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 APOHP02749 345 aaPredicted RBP12.3□□□□□ -0.44
PVT1-220ENST00000524165 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
PVT1-220ENST00000524165 INSL4Q14641 139 aa12.3□□□□□ -0.44
PVT1-220ENST00000524165 ACSM3Q53FZ2 586 aa12.3□□□□□ -0.44
PVT1-220ENST00000524165 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
PVT1-220ENST00000524165 TRAV3A0A0B4J244 114 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 LOC100130705A0A1B0GUX0 176 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 ZNF705FA8MVS1 300 aaPredicted RBP12.29□□□□□ -0.44
PVT1-220ENST00000524165 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 ZNF705DP0CH99 300 aaPredicted RBP12.29□□□□□ -0.44
PVT1-220ENST00000524165 ZNF705BP0CI00 300 aaPredicted RBP12.29□□□□□ -0.44
PVT1-220ENST00000524165 TRAPPC2P0DI81 140 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 TRAPPC2BP0DI82 140 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 FAM222AQ5U5X8 452 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 TMEM80Q96HE8 168 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 TXN2Q99757 166 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 TMEM231Q9H6L2 316 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 PTTG2Q9NZH5 202 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 XCL2Q9UBD3 114 aa12.29□□□□□ -0.44
PVT1-220ENST00000524165 ERICH4A6NGS2 130 aa12.28□□□□□ -0.44
PVT1-220ENST00000524165 POU2AF1Q16633 256 aa12.28□□□□□ -0.44
PVT1-220ENST00000524165 RAB3CQ96E17 227 aa12.28□□□□□ -0.44
PVT1-220ENST00000524165 TAS2R8Q9NYW2 309 aa12.28□□□□□ -0.44
PVT1-220ENST00000524165 RFNGQ9Y644 331 aa12.28□□□□□ -0.44
PVT1-220ENST00000524165 SLC17A2O00624 439 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 MFAP4P55083 255 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 TAS2R31P59538 309 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 CCDC197Q8NCU1 140 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 RAB40CQ96S21 281 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 PLGRKTQ9HBL7 147 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 MDFICQ9P1T7 246 aa12.27□□□□□ -0.45
PVT1-220ENST00000524165 PUS1Q9Y606 427 aaKnown RBP eCLIP12.27□□□□□ -0.45
PVT1-220ENST00000524165 IGKV1D-8A0A087WSZ0 117 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 IGKV1D-13A0A0B4J2D9 117 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 IGHV3-66A0A0C4DH42 116 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 IGKV1-13P0DP09 117 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 NFYAP23511 347 aaPredicted RBP12.26□□□□□ -0.45
PVT1-220ENST00000524165 RCN1Q15293 331 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 HSD17B12Q53GQ0 312 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 TOMM20LQ6UXN7 152 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 CBR4Q8N4T8 237 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 MS4A15Q8N5U1 240 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 SYT8Q8NBV8 401 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 LSM10Q969L4 123 aaKnown RBP12.26□□□□□ -0.45
PVT1-220ENST00000524165 ZNF503Q96F45 646 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 C17orf77Q96MU5 243 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 PGPEP1Q9NXJ5 209 aa12.26□□□□□ -0.45
PVT1-220ENST00000524165 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 EFCAB10A6NFE3 127 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.451e-7■■■■□ 26.5
PVT1-220ENST00000524165 DENRO43583 198 aaKnown RBP12.25□□□□□ -0.45
PVT1-220ENST00000524165 CTXN2P0C2S0 81 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 NQO2P16083 231 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 CCL18P55774 89 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 OR1L8Q8NGR8 309 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 DCANP1Q8TF63 244 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 DCSTAMPQ9H295 470 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 NDUFA4L2Q9NRX3 87 aa12.25□□□□□ -0.45
PVT1-220ENST00000524165 FAM229AH3BQW9 127 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 MFNGO00587 321 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 GNRHRP30968 328 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 TALDO1P37837 337 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 RAB11BQ15907 218 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 C1orf146Q5VVC0 180 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 GSG1LQ6UXU4 331 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 SPAG16Q8N0X2 631 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
PVT1-220ENST00000524165 A0A1W2PS18 150 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 HPRT1P00492 218 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 WNT4P56705 351 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 KCTD21Q4G0X4 260 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 SLC25A46Q96AG3 418 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 FAM3DQ96BQ1 224 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 GPHA2Q96T91 129 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 GFI1Q99684 422 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 LINC00588Q9Y4M8 146 aa12.23□□□□□ -0.45
PVT1-220ENST00000524165 I3L2K1 104 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 GNG7O60262 68 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 UCHL1P09936 223 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
PVT1-220ENST00000524165 GADD45AP24522 165 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 RANBP1P43487 201 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 C2orf76Q3KRA6 126 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 Q6ZSN1 163 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 OR10R2Q8NGX6 335 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 KRTAP1-5Q9BYS1 174 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 RAB22AQ9UL26 194 aa12.22□□□□□ -0.45
PVT1-220ENST00000524165 KRTAP29-1A8MX34 341 aaPredicted RBP12.21□□□□□ -0.45
PVT1-220ENST00000524165 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.45
PVT1-220ENST00000524165 DTYMKP23919 212 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 ALDH3B2P48448 385 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 DAD1P61803 113 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 ST3GAL4Q11206 333 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 MSMO1Q15800 293 aa12.21□□□□□ -0.45
PVT1-220ENST00000524165 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms