RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 SOSTQ9BQB4 213 aa6.99□□□□□ -1.29
SDC2-207ENST00000522911 ST6GALNAC5Q9BVH7 336 aa6.99□□□□□ -1.29
SDC2-207ENST00000522911 ATG5Q9H1Y0 275 aa6.99□□□□□ -1.29
SDC2-207ENST00000522911 ELF5Q9UKW6 265 aaPredicted RBP6.99□□□□□ -1.29
SDC2-207ENST00000522911 FAM240BA0A1B0GVZ2 78 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 MFSD2BA6NFX1 497 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 CYB5BO43169 146 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 SSX5O60225 188 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 C1QBP02746 253 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 DEFA4P12838 97 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 GNG2P59768 71 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 MXD1Q05195 221 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 SPSB3Q6PJ21 355 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 CEMP1Q6PRD7 247 aaPredicted RBP6.98□□□□□ -1.29
SDC2-207ENST00000522911 BTNL8Q6UX41 500 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 UNQ9165/PRO28630Q6UXU0 137 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 RBPMS2Q6ZRY4 209 aaKnown RBP6.98□□□□□ -1.29
SDC2-207ENST00000522911 C19orf35Q6ZS72 473 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 SLC38A6Q8IZM9 456 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 SLC7A5P1Q8MH63 180 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 ZFAND1Q8TCF1 268 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 CD300LFQ8TDQ1 290 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 TMEM190Q8WZ59 177 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 RNF183Q96D59 192 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 BSCL2Q96G97 398 aaPredicted RBP6.98□□□□□ -1.29
SDC2-207ENST00000522911 MIXL1Q9H2W2 232 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 PLEKHA2Q9HB19 425 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 DAZ1Q9NQZ3 744 aaKnown RBP6.98□□□□□ -1.29
SDC2-207ENST00000522911 COPZ2Q9P299 210 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 SPATA2Q9UM82 520 aa6.98□□□□□ -1.29
SDC2-207ENST00000522911 ZNF320A2RRD8 509 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 TMEM235A6NFC5 223 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 K7EMT4 169 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 LYRM1O43325 122 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 TGOLN2O43493 480 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 SPRY2O43597 315 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 HPRT1P00492 218 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 NQO2P16083 231 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 ARPC4P59998 168 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 IL18Q14116 193 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 OR2B11Q5JQS5 317 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 LAMTOR1Q6IAA8 161 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 LYG2Q86SG7 212 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 TMEM217Q8N7C4 229 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 NUDCD2Q8WVJ2 157 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 GIMAP1Q8WWP7 306 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 HYLS1Q96M11 299 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 CMTM3Q96MX0 182 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 C7orf50Q9BRJ6 194 aaKnown RBP6.97□□□□□ -1.29
SDC2-207ENST00000522911 MARVELD1Q9BSK0 173 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 QTRT1Q9BXR0 403 aaKnown RBP6.97□□□□□ -1.29
SDC2-207ENST00000522911 TAS2R8Q9NYW2 309 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 COMMD9Q9P000 198 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 COMMD3Q9UBI1 195 aa6.97□□□□□ -1.29
SDC2-207ENST00000522911 KLK5Q9Y337 293 aaPredicted RBP6.97□□□□□ -1.29
SDC2-207ENST00000522911 A0A0J9YWU9 116 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 CXorf65A6NEN9 183 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 NDUFA4O00483 81 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 UPK2O00526 184 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 PLA2G10O15496 165 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 SCAF4O95104 1147 aaKnown RBP6.96□□□□□ -1.3
SDC2-207ENST00000522911 PPYP01298 95 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 SERPINE2P07093 398 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 FCGR2BP31994 310 aaPredicted RBP6.96□□□□□ -1.3
SDC2-207ENST00000522911 GPR183P32249 361 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 NKX2-5P52952 324 aaPredicted RBP6.96□□□□□ -1.3
SDC2-207ENST00000522911 CATR1Q13166 79 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 ODF3L2Q3SX64 289 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 ZNF585BQ52M93 769 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 LGALS9CQ6DKI2 356 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 HOGA1Q86XE5 327 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 SPAG16Q8N0X2 631 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 BEST4Q8NFU0 473 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 GALNT14Q96FL9 552 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 COMMD5Q9GZQ3 224 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 ETV7Q9Y603 341 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 HERC2O95714 4834 aa6.96□□□□□ -1.3
SDC2-207ENST00000522911 OR4C46A6NHA9 309 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 C15orf62A8K5M9 175 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 INMT-MINDY4F8WBC2 141 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 HPGDSO60760 199 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 LY6G6CO95867 125 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 C4BPBP20851 252 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 CBX5P45973 191 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 CMC4P56277 68 aaPredicted RBP6.95□□□□□ -1.3
SDC2-207ENST00000522911 TCTAP57738 103 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 RRAS2P62070 204 aaPredicted RBP6.95□□□□□ -1.3
SDC2-207ENST00000522911 EWSR1Q01844 656 aaKnown RBP eCLIP6.95□□□□□ -1.3
SDC2-207ENST00000522911 SFXN4Q6P4A7 337 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 SSX9Q7RTT3 188 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 STPG3Q8N7X2 389 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 C15orf40Q8WUR7 153 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 GATAD1Q8WUU5 269 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 SECTM1Q8WVN6 248 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 MAP6D1Q9H9H5 199 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 CCL28Q9NRJ3 127 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 NDUFA4L2Q9NRX3 87 aa6.95□□□□□ -1.3
SDC2-207ENST00000522911 FAM212BQ9NTI7 297 aaPredicted RBP6.95□□□□□ -1.3
SDC2-207ENST00000522911 LINC00854A0A1B0GVQ3 168 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms