RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 BSXQ3C1V8 233 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 UBE2NLQ5JXB2 153 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF343Q6P1L6 599 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 MMD2Q8IY49 270 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 TTC9CQ8N5M4 171 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 SAMD12Q8N8I0 201 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 ADAD2Q8NCV1 583 aaKnown RBP7.17□□□□□ -1.26
HDAC3-215ENST00000519474 DMBX1Q8NFW5 382 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 OR13F1Q8NGS4 319 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 SECTM1Q8WVN6 248 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 TCTEX1D2Q8WW35 142 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 SRSF12Q8WXF0 261 aaKnown RBP7.17□□□□□ -1.26
HDAC3-215ENST00000519474 NUDT11Q96G61 164 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 B9D2Q9BPU9 175 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 NAA50Q9GZZ1 169 aaKnown RBP7.17□□□□□ -1.26
HDAC3-215ENST00000519474 VCX2Q9H322 139 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 MCUBQ9NWR8 336 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 TAS2R8Q9NYW2 309 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 COPZ2Q9P299 210 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 COMMD3Q9UBI1 195 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 ANAPC10Q9UM13 185 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 TGP01266 2768 aa7.17□□□□□ -1.26
HDAC3-215ENST00000519474 C13orf42A0A1B0GVH6 325 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 A0A1B0GW64 132 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 TNFSF12O43508 249 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 OR2A4O95047 310 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 PRH1P02810 166 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 EIF4EP06730 217 aaKnown RBP7.16□□□□□ -1.26
HDAC3-215ENST00000519474 PRSS3P35030 304 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 MAS1LP35410 378 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 DEFA5Q01523 94 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 FGL1Q08830 312 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 SPANXN2Q5MJ10 180 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 C10orf55Q5SWW7 151 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 IL34Q6ZMJ4 242 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF818PQ6ZRF7 136 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 NOXA1Q86UR1 476 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 TMEM167AQ8TBQ9 72 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 ACOT12Q8WYK0 555 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 ISOC1Q96CN7 298 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 KCTD12Q96CX2 325 aaKnown RBP7.16□□□□□ -1.26
HDAC3-215ENST00000519474 USMG5Q96IX5 58 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 OR2A7Q96R45 310 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 PHB2Q99623 299 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 RSRP1Q9BUV0 290 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 GGACTQ9BVM4 153 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 ADAM30Q9UKF2 790 aa7.16□□□□□ -1.26
HDAC3-215ENST00000519474 ZNF256Q9Y2P7 627 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-215ENST00000519474 CGB1A6NKQ9 187 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 TEX22C9J3V5 150 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 K7EP13 123 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SAP30O75446 220 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 EIF3GO75821 320 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SCO1O75880 301 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 HRASP01112 189 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 TRBV12-3P01733 135 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 PMP2P02689 132 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 IL7P13232 177 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 MYOD1P15172 320 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SPNP16150 400 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 ELK1P19419 428 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 FXYD4P59646 89 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 BTN1A1Q13410 526 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 PSG3Q16557 428 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 CTF1Q16619 201 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 VAX1Q5SQQ9 334 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 C11orf87Q6NUJ2 197 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 OR4S2Q8NH73 311 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 GPX8Q8TED1 209 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 OR4C12Q96R67 309 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SPIN2AQ99865 258 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SPIN2BQ9BPZ2 258 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 AKIP1Q9NQ31 210 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SLC2A9Q9NRM0 540 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 SMPXQ9UHP9 88 aa7.15□□□□□ -1.26
HDAC3-215ENST00000519474 TRAV3A0A0B4J244 114 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 F8WDY8 70 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 UPK2O00526 184 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 RBFOX2O43251 390 aaKnown RBP eCLIP7.14□□□□□ -1.27
HDAC3-215ENST00000519474 HPGDSO60760 199 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 PGLYRP1O75594 196 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-215ENST00000519474 ACTL6BO94805 426 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 KBTBD11O94819 623 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 HPRT1P00492 218 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 METTL15P1P0C7V9 234 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 KIR2DS2P43631 304 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 RORCP51449 518 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 TMBIM6P55061 237 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 RHOGP84095 191 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 ATP5G2Q06055 141 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 CD69Q07108 199 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 KLK9Q2XQG4 91 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 TMEM69Q5SWH9 247 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 Q8N1Y9 231 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 VSTM2AQ8TAG5 236 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 SORL1Q92673 2214 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 FANCD2OSQ96PS1 177 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 EHFQ9NZC4 300 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms