RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
PABPC1-208ENST00000519004 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
PABPC1-208ENST00000519004 PTPRSQ13332 1948 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 SEC16AO15027 2179 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 OR5AL1P0C617 328 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 COL9A1P20849 921 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 CA6P23280 308 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 NOGQ13253 232 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 PSG5Q15238 335 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 H2BFWTQ7Z2G1 175 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 LINC00596Q86U02 117 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 FGFBP3Q8TAT2 258 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 GRAMD2BQ96HH9 432 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-208ENST00000519004 CD24P25063 80 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 TMPRSS3P57727 454 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 CEACAM16Q2WEN9 425 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 TMEM196Q5HYL7 178 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 TEX45Q8NA69 505 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 SNRNP40Q96DI7 357 aaKnown RBP11.16□□□□□ -0.62
PABPC1-208ENST00000519004 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 IDI2-AS1Q9NZ38 188 aa11.16□□□□□ -0.62
PABPC1-208ENST00000519004 KIR2DL1P43626 348 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-208ENST00000519004 YPEL5P62699 121 aa11.15□□□□□ -0.62
PABPC1-208ENST00000519004 FAM231DQ6ZW35 169 aa11.15□□□□□ -0.62
PABPC1-208ENST00000519004 PLPPR2Q96GM1 343 aa11.15□□□□□ -0.62
PABPC1-208ENST00000519004 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
PABPC1-208ENST00000519004 R4GN57 208 aa11.15□□□□□ -0.62
PABPC1-208ENST00000519004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.15□□□□□ -0.63
PABPC1-208ENST00000519004 B4GALT1P15291 398 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 ARL4DP49703 201 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 AESQ08117 197 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 LTC4SQ16873 150 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 ZNF808Q8N4W9 903 aaPredicted RBP11.15□□□□□ -0.63
PABPC1-208ENST00000519004 BADQ92934 168 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 ZNF503Q96F45 646 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 OR2H1Q9GZK4 316 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 SLC25A10Q9UBX3 287 aaPredicted RBP11.15□□□□□ -0.63
PABPC1-208ENST00000519004 DUSP13Q9UII6 198 aa11.15□□□□□ -0.63
PABPC1-208ENST00000519004 BOKQ9UMX3 212 aaPredicted RBP11.15□□□□□ -0.63
PABPC1-208ENST00000519004 OR9G9P0C7N8 305 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 FCGR2BP31994 310 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-208ENST00000519004 RAC3P60763 192 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 ACP7Q6ZNF0 438 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 CDX2Q99626 313 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-208ENST00000519004 RPP25Q9BUL9 199 aaKnown RBP11.14□□□□□ -0.63
PABPC1-208ENST00000519004 METTL7AQ9H8H3 244 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 TMEM167BQ9NRX6 74 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 LTBP2Q14767 1821 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 HIGD1CA8MV81 97 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 CELA3AP09093 270 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 FAM87AP0C7U9 286 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 SPINK2P20155 84 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 ABHD17AQ96GS6 310 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-208ENST00000519004 C1QTNF5Q9BXJ0 243 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
PABPC1-208ENST00000519004 NCKAP5O14513 1909 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 ACTL6BO94805 426 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 NCR2O95944 276 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 MYF5P13349 255 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 PARM1Q6UWI2 310 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 ZBTB34Q8NCN2 500 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 OR1L3Q8NH93 324 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 DPF1Q92782 380 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 C19orf24Q9BVV8 132 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 SH2D2AQ9NP31 389 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 GCM1Q9NP62 436 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 LOXL2Q9Y4K0 774 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 A0A1W2PQF6 199 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
PABPC1-208ENST00000519004 J3QR89 54 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 IGHV3-7P01780 117 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 FAM53AQ6NSI3 398 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-208ENST00000519004 TRAT1Q6PIZ9 186 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 LINC00696Q6ZRV3 163 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 NANOS1Q8WY41 292 aaKnown RBP11.13□□□□□ -0.63
PABPC1-208ENST00000519004 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
PABPC1-208ENST00000519004 GATA3P23771 443 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 CATR1Q13166 79 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 ESPL1Q14674 2120 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 NRN1LQ496H8 165 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-208ENST00000519004 Q6P435 159 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 TEPPQ6URK8 271 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 SHISA2Q6UWI4 295 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
PABPC1-208ENST00000519004 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 VGLL1Q99990 258 aa11.12□□□□□ -0.63
PABPC1-208ENST00000519004 A1L4Q6 167 aa11.11□□□□□ -0.63
PABPC1-208ENST00000519004 VDAC2P45880 294 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms