RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 SLIRPQ9GZT3 109 aaKnown RBP5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TUBA4BQ9H853 241 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ZMAT4Q9H898 229 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 MCUBQ9NWR8 336 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 KLK9Q9UKQ9 250 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 KCNIP3Q9Y2W7 256 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 F11RQ9Y624 299 aaKnown RBP5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 U3KQK5 164 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
SCARNA18.2-201ENST00000516882 PIGBOS1A0A0B4J2F0 54 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 MFSD2BA6NFX1 497 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 OR2T8A6NH00 312 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 C2orf70A6NJV1 201 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TGOLN2O43493 480 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 GSTZ1O43708 216 aaPredicted RBP5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 FRMD6-AS1P0C7T7 363 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 FOLR2P14207 255 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CBLN1P23435 193 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TNFSF8P32971 234 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 PRCDQ00LT1 54 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 DHODHQ02127 395 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 GUCA2BQ16661 112 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 PYDC2Q56P42 97 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 Q56UQ5 140 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SPANXN2Q5MJ10 180 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 C11orf87Q6NUJ2 197 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 FAAP20Q6NZ36 180 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IL34Q6ZMJ4 242 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 FAM219AQ8IW50 185 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TOMM5Q8N4H5 51 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 UBAC2Q8NBM4 344 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 OR4C16Q8NGL9 310 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 OR1P1Q8NH06 330 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ZNF502Q8TBZ5 544 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 MARC2Q969Z3 335 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 MISP3Q96FF7 219 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 BSCL2Q96G97 398 aaPredicted RBP5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 WWC2-AS2Q96NR7 200 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TP53RKQ96S44 253 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ATP6V0BQ99437 205 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ASCL2Q99929 193 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 THAP7Q9BT49 309 aaPredicted RBP5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ZC4H2Q9NQZ6 224 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SLC2A8Q9NY64 477 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 C21orf62Q9NYP8 219 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CACFD1Q9UGQ2 172 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 UFC1Q9Y3C8 167 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CEPT1Q9Y6K0 416 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 DNAH3Q8TD57 4116 aa5.42□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IGHV3-35A0A0C4DH35 117 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ANKRD20A5PA0PJZ0 165 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 A8MWP6 167 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ZNF701M0R085 212 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CORTO00230 105 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 NUPL2O15504 423 aaKnown RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SCGB2A1O75556 95 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IGKV1-39P01597 117 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IGKV1D-39P04432 117 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 OR5AC1P0C628 307 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IGHV4-30-4P0DP06 118 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ANXA3P12429 323 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 UCP1P25874 307 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 INPP1P49441 399 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 HOXA1P49639 335 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 MFAP4P55083 255 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ELLP55199 621 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CD81P60033 236 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 RELQ04864 619 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 DEFB114Q30KQ6 69 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ANKRD55Q3KP44 614 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SP6Q3SY56 376 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CD300EQ496F6 205 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ZNF57Q68EA5 555 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 RBPMS2Q6ZRY4 209 aaKnown RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SLC16A13Q7RTY0 426 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 OR2C3Q8N628 320 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 OR51S1Q8NGJ8 323 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SCARB1Q8WTV0 552 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 RBPMSQ93062 196 aaKnown RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 PINX1Q96BK5 328 aaKnown RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 NXF2Q9GZY0 626 aaKnown RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TMEM222Q9H0R3 208 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 NAA60Q9H7X0 242 aa5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 MRPL27Q9P0M9 148 aaKnown RBP5.41□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IGHV3-21A0A0B4J1V1 117 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CRYM-AS1A6NIL9 109 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 DBX1A6NMT0 343 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 A8MZ25 164 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 NDUFA4O00483 81 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 ST8SIA3O43173 380 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 GNG7O60262 68 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 CDS2O95674 445 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 IGKV1-5P01602 117 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 AKR1C4P17516 323 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 NPBWR1P48145 328 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SRPXP78539 464 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 TMEM268Q5VZI3 342 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 LAMTOR1Q6IAA8 161 aa5.4□□□□□ -1.54
SCARNA18.2-201ENST00000516882 SBSPONQ8IVN8 264 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms