RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 OR2J3O76001 311 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 IFNA17P01571 189 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 ELANEP08246 267 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 SULT1A3P0DMM9 295 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 SULT1A4P0DMN0 295 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 OR13C7P0DN81 318 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 PSMB6P28072 239 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 HOXA1P49639 335 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 RAB9AP51151 201 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 GGNBP1Q5YKI7 109 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 TMEM65Q6PI78 240 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 NDUFA11Q86Y39 141 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 COMMD1Q8N668 190 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 UXS1Q8NBZ7 420 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 OR5M8Q8NGP6 311 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 COQ8AQ8NI60 647 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 LSM10Q969L4 123 aaKnown RBP7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 NDUFA4L2Q9NRX3 87 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 DMRT1Q9Y5R6 373 aa7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 TSSC4Q9Y5U2 329 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-209ENST00000513818 IGHV3-21A0A0B4J1V1 117 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 NPIPB5A8MRT5 1133 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 INMT-MINDY4F8WBC2 141 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 DUS4LO95620 317 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 IGHV3-23P01764 117 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 HNRNPCP07910 306 aaKnown RBP eCLIP7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 CTRB1P17538 263 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 MFAP2P55001 183 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 HSPE1P61604 102 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 RHOGP84095 191 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 PRCDQ00LT1 54 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 DCTN2Q13561 401 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 KIAA0141Q14154 515 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 SMCO1Q147U7 214 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 CTRB2Q6GPI1 263 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 PLET1Q6UQ28 207 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 TTC9CQ8N5M4 171 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 RNF152Q8N8N0 203 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 LRTM2Q8N967 370 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 DUSP18Q8NEJ0 188 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 OR5B3Q8NH48 314 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 MYOZ3Q8TDC0 251 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 MITD1Q8WV92 249 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 PDCD10Q9BUL8 212 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 PLEKHA3Q9HB20 300 aa7.61□□□□□ -1.19
TOPBP1-209ENST00000513818 DUXBA0A1W2PPF3 345 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 CEBPZOSA8MTT3 80 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 NDUFB8O95169 186 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 PTTG1O95997 202 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 FGF2P09038 288 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 DEFA4P12838 97 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 CD33P20138 364 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 C2orf68Q2NKX9 166 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 THOC7Q6I9Y2 204 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 ETV3LQ6ZN32 361 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 ZNF429Q86V71 674 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 CADM3Q8N126 398 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 ZNF491Q8N8L2 437 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 OR1S1Q8NH92 325 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 WDR89Q96FK6 387 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 FKBP11Q9NYL4 201 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 ZNF257Q9Y2Q1 563 aa7.6□□□□□ -1.19
TOPBP1-209ENST00000513818 IGLV11-55A0A075B6I3 123 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 MFSD2BA6NFX1 497 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 FAM25EA8MYX2 175 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 M0QZ24 198 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 WIPF1O43516 503 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 TRBV12-3P01733 135 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 CRYGCP07315 174 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 IAPPP10997 89 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 EXOSC2Q13868 293 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 C12orf45Q8N5I9 185 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 OR10C1Q96KK4 312 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 TMEM68Q96MH6 324 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 P2RX4Q99571 388 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 MARVELD1Q9BSK0 173 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 MAGT1Q9H0U3 335 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 RBKSQ9H477 322 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 SLA2Q9H6Q3 261 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 PALMDQ9NP74 551 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 ZFP57Q9NU63 452 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 FBXL7Q9UJT9 491 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 TMED3Q9Y3Q3 217 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 F11RQ9Y624 299 aaKnown RBP7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
TOPBP1-209ENST00000513818 IGHV4OR15-8A0A075B7B6 117 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 A0A087WW49 117 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 A0A1B0GU03 582 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 C13orf42A0A1B0GVH6 325 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 H3BUA1 57 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 PITX3O75364 302 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 IGHV3-48P01763 117 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 IL5P05113 134 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 CDX1P47902 265 aaPredicted RBP7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 SPCS3P61009 180 aa7.58□□□□□ -1.2
TOPBP1-209ENST00000513818 TNFRSF9Q07011 255 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms