RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ETV3LQ6ZN32 361 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 EIF4E3Q8N5X7 224 aaKnown RBP7.91□□□□□ -1.14
TPM3-221ENST00000513769 TMEM217Q8N7C4 229 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 RNASEH2CQ8TDP1 164 aaKnown RBP7.91□□□□□ -1.14
TPM3-221ENST00000513769 RITA1Q96K30 269 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 TMEM68Q96MH6 324 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 OR4C12Q96R67 309 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 TMEM147Q9BVK8 224 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 ZNF430Q9H8G1 570 aaPredicted RBP7.91□□□□□ -1.14
TPM3-221ENST00000513769 UQCC1Q9NVA1 299 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 CCDC168Q8NDH2 2452 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
TPM3-221ENST00000513769 ITPR3Q14573 2671 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 MED13LQ71F56 2210 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 RPS10-NUDT3A0A1W2PQS6 291 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 C15orf62A8K5M9 175 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 C17orf112F2Z3M2 114 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 CORTO00230 105 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 NBR2O15453 112 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 SLC25A17O43808 307 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 NXPH3O95157 252 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 IFNA4P05014 189 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 NPY1RP25929 384 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 HOXA1P49639 335 aaPredicted RBP7.9□□□□□ -1.14
TPM3-221ENST00000513769 SLC38A11Q08AI6 406 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 RAB31Q13636 194 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 ETFRF1Q6IPR1 90 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 CLEC9AQ6UXN8 241 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 LHFPL4Q7Z7J7 247 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 LILRB2Q8N423 598 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 COMMD1Q8N668 190 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 Q8N6K4 173 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 ZNF114Q8NC26 417 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 SLC24A4Q8NFF2 622 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 LYPD6BQ8NI32 183 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 TMED6Q8WW62 240 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 NRGNQ92686 78 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 MISP3Q96FF7 219 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 BSCL2Q96G97 398 aaPredicted RBP7.9□□□□□ -1.14
TPM3-221ENST00000513769 AJUBAQ96IF1 538 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 FOXC2Q99958 501 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 SMIM3Q9BZL3 60 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 WDR61Q9GZS3 305 aaKnown RBP7.9□□□□□ -1.14
TPM3-221ENST00000513769 PARP11Q9NR21 331 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 HIF1ANQ9NWT6 349 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 METTL1Q9UBP6 276 aaKnown RBP7.9□□□□□ -1.14
TPM3-221ENST00000513769 PFDN2Q9UHV9 154 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 FBXO7Q9Y3I1 522 aa7.9□□□□□ -1.14
TPM3-221ENST00000513769 HRNRQ86YZ3 2850 aaPredicted RBP7.9□□□□□ -1.15
TPM3-221ENST00000513769 ARID1AO14497 2285 aa7.9□□□□□ -1.15
TPM3-221ENST00000513769 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.15
TPM3-221ENST00000513769 TEX46H3BTG2 121 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 IGKV1D-33P01593 117 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 IGKV1-33P01594 117 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 ATP6V0CP27449 155 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 SAA4P35542 130 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 RPL27AP46776 148 aaKnown RBP7.89□□□□□ -1.15
TPM3-221ENST00000513769 DLX1P56177 255 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 ARL16Q0P5N6 197 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 CLINT1Q14677 625 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 C5orf64Q2M2E5 130 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 CYB5R2Q6BCY4 276 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 SLC25A24Q6NUK1 477 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 ZNF709Q8N972 641 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 OR2G3Q8NGZ4 309 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 TAF15Q92804 592 aaKnown RBP eCLIP7.89□□□□□ -1.15
TPM3-221ENST00000513769 MARC2Q969Z3 335 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 SMDT1Q9H4I9 107 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 U3KQE9 123 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 TACC2O95359 2948 aa7.89□□□□□ -1.15
TPM3-221ENST00000513769 ARHGAP32A7KAX9 2087 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 RAB19A4D1S5 217 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 BTBD17A6NE02 478 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 ZNF705EA8MWA4 302 aaPredicted RBP7.88□□□□□ -1.15
TPM3-221ENST00000513769 PRSS46E5RG02 174 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 H3BP45 60 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 CYB5BO43169 146 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 FBXO24O75426 580 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 CA2P00918 260 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 TGFAP01135 160 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 RAB2AP61019 212 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 KLRD1Q13241 179 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 PMS2P11Q13670 270 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 HES1Q14469 280 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 MMDQ15546 238 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 OR8G2PQ6IF36 304 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 TEPPQ6URK8 271 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 UQCC3Q6UW78 93 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 TMEM144Q7Z5S9 345 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 HAPLN4Q86UW8 402 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 SLC7A5P1Q8MH63 180 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 OR1P1Q8NH06 330 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 C19orf24Q9BVV8 132 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 HINT2Q9BX68 163 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 KCNIP2Q9NS61 270 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 PITPNC1Q9UKF7 332 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 WDR83OSQ9Y284 106 aa7.88□□□□□ -1.15
TPM3-221ENST00000513769 FAM96BQ9Y3D0 163 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms