RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 RPL12P30050 165 aaKnown RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 HMGA2P52926 109 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SLC25A1P53007 311 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 DHRS2Q13268 280 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 MESTQ5EB52 335 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C6orf201Q7Z4U5 140 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TTC9CQ8N5M4 171 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C1QTNF4Q9BXJ3 329 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 OR51B2Q9Y5P1 312 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TRDV1A0A1B0GX56 115 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 DPRXA6NFQ7 191 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 OR11H12B2RN74 326 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 MUC1P15941 1255 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 DLX6P56179 175 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 FAM201AQ5SY85 155 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C9orf66Q5T8R8 295 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 DLEU7Q6UYE1 221 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PRSS45Q7RTY3 260 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 NIT1Q86X76 327 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 GAPTQ8N292 157 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TPRX1Q8N7U7 411 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 OR11H1Q8NG94 326 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 OR11H2Q8NH07 326 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF502Q8TBZ5 544 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 C1orf159Q96HA4 380 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 KIR2DL4Q99706 377 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 GABARAPL3Q9BY60 117 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 Q9N2K0 584 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PCSK5Q92824 1860 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM178BH3BS89 294 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TNFSF13O75888 250 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 CST4P01036 141 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SOD3P08294 240 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TGFBR1P36897 503 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ZP1P60852 638 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 MEF2CQ06413 473 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ZNF429Q86V71 674 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TMEM167AQ8TBQ9 72 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 CDCA4Q9BXL8 241 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3-49A0A0A0MS15 119 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 ODAMA1E959 279 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3-23P01764 117 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TWIST1Q15672 202 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 SMN1Q16637 294 aaKnown RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 CGB2Q6NT52 195 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 BCDIN3DQ7Z5W3 292 aaKnown RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PRNTQ86SH4 94 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 DLX4Q92988 240 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-208ENST00000508342 PRELID3AQ96N28 172 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 NRIP2Q9BQI9 281 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 TMPRSS13Q9BYE2 586 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 RPRMQ9NS64 109 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 U3KQ87 197 aa2.47□□□□□ -2.01
NEDD4-208ENST00000508342 IGHV3OR16-13A0A075B7E8 117 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV3-74A0A0B4J1X5 117 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV1-69DA0A0B4J2H0 117 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 DNAJC9-AS1A6NH13 148 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IQCF6A8MYZ5 107 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 H3BUX3 64 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 SLC17A2O00624 439 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PHOX2AO14813 284 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PIN1P1O15428 100 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 OGG1O15527 345 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 SPINK4O60575 86 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 MMP23AO75900 390 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV1-69P01742 117 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 ALPLP05186 524 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CSN3P07498 182 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IL6RP08887 468 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 ASAH2BP0C7U1 165 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 RANP62826 216 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CX3CL1P78423 397 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CDK5R1Q15078 307 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM30BQ3MIR4 351 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM128Q5BJH2 165 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CLLU1Q5K131 121 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 OR10C1Q96KK4 312 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FCRL1Q96LA6 429 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 C2orf50Q96LR7 162 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FRRS1LQ9P0K9 344 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 NAT8BQ9UHF3 227 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 C3orf85A0A1B0GTC6 90 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IFITM5A6NNB3 132 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV4-39P01824 125 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TRGC1P0CF51 173 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PSG1P11464 419 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CCR6P51684 374 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 B3GALT5-AS1P59052 145 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 DEFA6Q01524 100 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 UNC119Q13432 240 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 HIST3H3Q16695 136 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 C6orf226Q5I0X4 101 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 PRSS54Q6PEW0 395 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM88Q6PEY1 159 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 SLC25A47Q6Q0C1 308 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 TEPPQ6URK8 271 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 FAM103A1Q9BTL3 118 aaKnown RBP2.46□□□□□ -2.02
NEDD4-208ENST00000508342 MIXL1Q9H2W2 232 aa2.46□□□□□ -2.02
NEDD4-208ENST00000508342 CALYQ9NYX4 217 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms