RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 ENY2Q9NPA8 101 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 PEF1Q9UBV8 284 aaKnown RBP11.59□□□□□ -0.55
RNF4-210ENST00000508235 CACNG5Q9UF02 275 aa11.59□□□□□ -0.55
RNF4-210ENST00000508235 ANK2Q01484 3957 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 IGHV4OR15-8A0A075B7B6 117 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 A0A087WW49 117 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 A0A0G2JRQ6 117 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 ANKRD34BA5PLL1 514 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 SULT1A3P0DMM9 295 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 SULT1A4P0DMN0 295 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 DEFA5Q01523 94 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 AARDQ4LEZ3 155 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 LRTM2Q8N967 370 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 EEF1AKMT3Q96AZ1 226 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 GPR146Q96CH1 333 aa11.58□□□□□ -0.56
RNF4-210ENST00000508235 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
RNF4-210ENST00000508235 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.57□□□□□ -0.56
RNF4-210ENST00000508235 TRBV7-1A0A0A6YYK4 115 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 HLA-AP01891 365 aaKnown RBP11.57□□□□□ -0.56
RNF4-210ENST00000508235 TCRBP04435 133 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 IGLL1P15814 213 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 SNCAP37840 140 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 HOXA1P49639 335 aaPredicted RBP11.57□□□□□ -0.56
RNF4-210ENST00000508235 SPCS3P61009 180 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 ASAH1Q13510 395 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 SAMD5Q5TGI4 173 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 SLC25A24Q6NUK1 477 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 OR2C3Q8N628 320 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 ZNF114Q8NC26 417 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 C20orf85Q9H1P6 137 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 PRR13Q9NZ81 148 aa11.57□□□□□ -0.56
RNF4-210ENST00000508235 A0A1B0GU03 582 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 FAM240BA0A1B0GVZ2 78 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 C9orf170A2RU37 121 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 OVOL1O14753 267 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 NDUFB8O95169 186 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 OR4E1P0C645 316 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 SUB1P53999 127 aaKnown RBP eCLIP11.56□□□□□ -0.56
RNF4-210ENST00000508235 SMCO1Q147U7 214 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 TATDN3Q17R31 274 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
RNF4-210ENST00000508235 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 Q6ZRM9 215 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 LYZL2Q7Z4W2 148 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 COQ8AQ8NI60 647 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 VN1R17PQ8TDU5 208 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 DCUN1D4Q92564 292 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 FLVCR2Q9UPI3 526 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
RNF4-210ENST00000508235 G3V4G9 280 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 SLC25A6P12236 298 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 HOXD3P31249 432 aaPredicted RBP11.55□□□□□ -0.56
RNF4-210ENST00000508235 SLURP1P55000 103 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 RPEL1Q2QD12 228 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 ANKRD55Q3KP44 614 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 LYG2Q86SG7 212 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 DLX4Q92988 240 aaPredicted RBP11.55□□□□□ -0.56
RNF4-210ENST00000508235 ZMAT5Q9UDW3 170 aaKnown RBP11.55□□□□□ -0.56
RNF4-210ENST00000508235 TBC1D24Q9ULP9 559 aa11.55□□□□□ -0.56
RNF4-210ENST00000508235 CORTO00230 105 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 ANXA7P20073 488 aaKnown RBP11.54□□□□□ -0.56
RNF4-210ENST00000508235 INSL3P51460 131 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 DEFA1P59665 94 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 DEFA3P59666 94 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 DHRS2Q13268 280 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 SPINK9Q5DT21 86 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 KPRPQ5T749 579 aaPredicted RBP11.54□□□□□ -0.56
RNF4-210ENST00000508235 OR1S1Q8NH92 325 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 ATP6V0BQ99437 205 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 NUDT15Q9NV35 164 aa11.54□□□□□ -0.56
RNF4-210ENST00000508235 GAR1Q9NY12 217 aaKnown RBP11.54□□□□□ -0.56
RNF4-210ENST00000508235 CEBPZOSA8MTT3 80 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 IFNA21P01568 189 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 ARL3P36405 182 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 BEAN1Q3B7T3 259 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 ENKURQ8TC29 256 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 ELOVL1Q9BW60 279 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 DMRT1Q9Y5R6 373 aa11.53□□□□□ -0.56
RNF4-210ENST00000508235 TRAV6A0A075B6T7 132 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 MFSD2BA6NFX1 497 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 WIPF1O43516 503 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 GGCTO75223 188 aaKnown RBP11.52□□□□□ -0.57
RNF4-210ENST00000508235 TRBV12-3P01733 135 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 IGHV3-23P01764 117 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 H2AFB2P0C5Z0 115 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 HTR2BP41595 481 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 MFAP2P55001 183 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
RNF4-210ENST00000508235 KLF5Q13887 457 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms