RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SPINK4O60575 86 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 LOXL3P58215 753 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 MRPL54Q6P161 138 aaKnown RBP14.57□□□□□ -0.08
NUP54-205ENST00000507257 SPACA3Q8IXA5 215 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 VKORC1L1Q8N0U8 176 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 TPRX1Q8N7U7 411 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 OR2V2Q96R30 315 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 CHRDL1Q9BU40 450 aa14.57□□□□□ -0.08
NUP54-205ENST00000507257 MRPL32Q9BYC8 188 aaKnown RBP14.57□□□□□ -0.08
NUP54-205ENST00000507257 COL27A1Q8IZC6 1860 aaPredicted RBP14.57□□□□□ -0.08
NUP54-205ENST00000507257 FAM181BA6NEQ2 426 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 TNFSF4P23510 183 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 SLAQ13239 276 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 FAM162BQ5T6X4 162 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 FAM19A2Q8N3H0 131 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 CD177Q8N6Q3 437 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 NCOR1P1Q9H4R4 102 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 PLEKHA3Q9HB20 300 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 ZNF257Q9Y2Q1 563 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 CEP290O15078 2479 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 HSBP1O75506 76 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 COTL1Q14019 142 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 C3AR1Q16581 482 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 CXorf67Q86X51 503 aaPredicted RBP14.56□□□□□ -0.08
NUP54-205ENST00000507257 PPP1R35Q8TAP8 253 aa14.56□□□□□ -0.08
NUP54-205ENST00000507257 LOC105371242A0A075B767 164 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 A0A1W2PN81 502 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 MGST3O14880 152 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 PRDX2P32119 198 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 HINT1P49773 126 aaPredicted RBP14.55□□□□□ -0.08
NUP54-205ENST00000507257 TCL1AP56279 114 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 UBE2G1P62253 170 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 MZT1Q08AG7 82 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 RPL39P5Q59GN2 51 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 PEAR1Q5VY43 1037 aaPredicted RBP14.55□□□□□ -0.08
NUP54-205ENST00000507257 OR4A47Q6IF82 309 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 UNQ5815/PRO19632Q6UWF5 114 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 ATP5L2Q7Z4Y8 100 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 GRAMD2BQ96HH9 432 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 ADTRPQ96IZ2 230 aa14.55□□□□□ -0.08
NUP54-205ENST00000507257 KLF13Q9Y2Y9 288 aaPredicted RBP14.55□□□□□ -0.08
NUP54-205ENST00000507257 C2orf70A6NJV1 201 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 C8orf88P0DMB2 117 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 NTF3P20783 257 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 SLC35B1P78383 322 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 TNXAQ16473 311 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 FBLN7Q53RD9 439 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 ALKBH7Q9BT30 221 aaPredicted RBP14.54□□□□□ -0.08
NUP54-205ENST00000507257 DCTN5Q9BTE1 182 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 GSX1Q9H4S2 264 aaPredicted RBP14.54□□□□□ -0.08
NUP54-205ENST00000507257 RAB9BQ9NP90 201 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 IDI2-AS1Q9NZ38 188 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 PRNDQ9UKY0 176 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 DNAJC13O75165 2243 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 TRAV30A0A087WSZ9 112 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 AHRRA9YTQ3 701 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 CRXO43186 299 aaPredicted RBP14.54□□□□□ -0.08
NUP54-205ENST00000507257 OR7C2O60412 319 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 ACTL6BO94805 426 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 IGHV1-2P23083 117 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 EBLN2Q6P2I7 272 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 LYG1Q8N1E2 194 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 SLC25A33Q9BSK2 321 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 SPRY4Q9C004 299 aa14.54□□□□□ -0.08
NUP54-205ENST00000507257 IGLL1P15814 213 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 REG1BP48304 166 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 ZNF134P52741 427 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 ARG2P78540 354 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 RHOGP84095 191 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 LRRC10Q5BKY1 277 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 VWA1Q6PCB0 445 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 ST20Q9HBF5 79 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 TRAV34A0A0B4J273 112 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 C21orf140B9A014 251 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 M0R2Z0 102 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 IGKV3-15P01624 115 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 TFF1P04155 84 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 MGST1P10620 155 aaKnown RBP14.53□□□□□ -0.08
NUP54-205ENST00000507257 MEOX1P50221 254 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 PRCDQ00LT1 54 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 C2orf83Q53S99 150 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 LCN12Q6JVE5 192 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 TRIB1Q96RU8 372 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 FAM234AQ9H0X4 552 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 TNFRSF19Q9NS68 423 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 SERTAD4Q9NUC0 356 aa14.53□□□□□ -0.08
NUP54-205ENST00000507257 SRRM5B3KS81 715 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 CER1O95813 267 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 PPBPP02775 128 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 CFIP05156 583 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 CFHR2P36980 270 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 EDDM3AQ14507 147 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 LTC4SQ16873 150 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 SMIM12Q96EX1 92 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 OR51B2Q9Y5P1 312 aa14.52□□□□□ -0.09
NUP54-205ENST00000507257 WDR87Q6ZQQ6 2873 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 IGKV1OR2-108A0A075B7D4 117 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 KLRC4-KLRK1H3BQV0 150 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 CGB3P0DN86 165 aa14.51□□□□□ -0.09
NUP54-205ENST00000507257 CGB7P0DN87 165 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms