RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 OR2J3O76001 311 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 IGHV3-48P01763 117 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 IAPPP10997 89 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 PSMB6P28072 239 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 TMEM267Q0VDI3 215 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 IAH1Q2TAA2 248 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 DUX3Q96PT4 197 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 RBKSQ9H477 322 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 GPN1Q9HCN4 374 aaPredicted RBP6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 TMED3Q9Y3Q3 217 aa6.88□□□□□ -1.31
SCAMP1-202ENST00000506858 A0A1B0GU03 582 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TCRBV4S1A1TA0A5B7 111 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 C7orf66A4D0T2 115 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CEBPZOSA8MTT3 80 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 NDUFB8O95169 186 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 IFNA21P01568 189 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 IGHG4P01861 327 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TRGV3P03979 118 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CTRB1P17538 263 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CXCL3P19876 107 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 PSMB8P28062 276 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 HOXA1P49639 335 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 RAB9AP51151 201 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CRIP2P52943 208 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TPPP2P59282 170 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 POLR2GP62487 172 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 SLC35B1P78383 322 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 PRCDQ00LT1 54 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 KIAA0141Q14154 515 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 FCN2Q15485 313 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 MLANAQ16655 118 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 DEFB136Q30KP8 78 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CTRB2Q6GPI1 263 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TEX38Q6PEX7 206 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 ZNF429Q86V71 674 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 ZBTB8BQ8NAP8 495 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 FAM110DQ8TAY7 271 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 GNB4Q9HAV0 340 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 FKBP11Q9NYL4 201 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 A0A1B0GUS0 222 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 DUXBA0A1W2PPF3 345 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 WRBO00258 174 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 PRAF2O60831 178 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 SPCS3P61009 180 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CD83Q01151 205 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TNFRSF9Q07011 255 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 SLC25A24Q6NUK1 477 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 CADM3Q8N126 398 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TTC9CQ8N5M4 171 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 SPATA3Q8NHX4 192 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 TMEM170AQ8WVE7 144 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 P2RX4Q99571 388 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 PDCD10Q9BUL8 212 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 ZNF747Q9BV97 191 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 PLEKHA3Q9HB20 300 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 HEYLQ9NQ87 328 aaPredicted RBP6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 ZNF257Q9Y2Q1 563 aa6.87□□□□□ -1.31
SCAMP1-202ENST00000506858 hCG_2014768A0A024R1R8 64 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 H3BP45 60 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 TMEM50AO95807 157 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 MBPP02686 304 aaPredicted RBP6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 FGF2P09038 288 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 DEFA4P12838 97 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 H2BFSP57053 126 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 RHOGP84095 191 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 FOXE3Q13461 319 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 AARDQ4LEZ3 155 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 TMEM65Q6PI78 240 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 OR2C3Q8N628 320 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 OR11H7Q8NGC8 314 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 OR4X2Q8NGF9 303 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 OR4D5Q8NGN0 318 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 CITED1Q99966 193 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 HSPB7Q9UBY9 170 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 FBXL7Q9UJT9 491 aa6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 LSM5Q9Y4Y9 91 aaKnown RBP6.86□□□□□ -1.31
SCAMP1-202ENST00000506858 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 MFSD2BA6NFX1 497 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 NPIPB5A8MRT5 1133 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 SSSCA1O60232 199 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 TRBV12-3P01733 135 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 CRYGCP07315 174 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 ID3Q02535 119 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 LRRC37A5PQ49AS3 106 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 GSG1LQ6UXU4 331 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 C8orf86Q6ZUL3 223 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 ZNF491Q8N8L2 437 aa6.85□□□□□ -1.31
SCAMP1-202ENST00000506858 DTD1Q8TEA8 209 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms