RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SETD5Q9C0A6 1442 aa0.98□□□□□ -2.25
TOPBP1-204ENST00000505804 DOCK5Q9H7D0 1870 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 PCF11O94913 1555 aaKnown RBP0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 GGT3PA6NGU5 568 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 ATP5HO75947 161 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 TNNC2P02585 160 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 TCRBP04435 133 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 IFNA6P05013 189 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 SULT1A3P0DMM9 295 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 SULT1A4P0DMN0 295 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 OMPP47874 163 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 SULT1A1P50225 295 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 AP3S2P59780 193 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 POLR2GP62487 172 aaKnown RBP eCLIP0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 RANP62826 216 aaKnown RBP0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 CCL7P80098 99 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 IFITM2Q01629 132 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 AESQ08117 197 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 BATFQ16520 125 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 SPOPLQ6IQ16 392 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 TRAPPC5Q8IUR0 188 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 C1orf158Q8N1D5 194 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 TMEM86BQ8N661 226 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 PAIP2Q9BPZ3 127 aaKnown RBP0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 MED9Q9NWA0 146 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 LSM5Q9Y4Y9 91 aaKnown RBP0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 ZFYVE9O95405 1425 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 NCOA1Q15788 1441 aa0.97□□□□□ -2.25
TOPBP1-204ENST00000505804 TGIF2-C20orf24A0A0A6YYL0 155 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 TRBV10-2A0A0K0K1G8 114 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 KPNA3O00505 521 aaPredicted RBP0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 SLC22A1O15245 554 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 CHP2O43745 196 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 IGHV3-7P01780 117 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 SRP19P09132 144 aaKnown RBP0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 OR5G3P0C626 314 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 FAM228BP0C875 321 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 IL9P15248 144 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 MARCKSL1P49006 195 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 SPCS3P61009 180 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 ERVS71-1P61550 626 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 REEP5Q00765 189 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 SRSF6Q13247 344 aaKnown RBP0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 DEFB125Q8N687 156 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 OR51D1Q8NGF3 324 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 OR8B3Q8NGG8 313 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 SLC35B4Q969S0 331 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 IMP4Q96G21 291 aaKnown RBP0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 PRAP1Q96NZ9 151 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 CCDC94Q9BW85 323 aaPredicted RBP0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 TLNRD1Q9H1K6 362 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 IL20Q9NYY1 176 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 RSL24D1Q9UHA3 163 aaKnown RBP0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 LHFPL6Q9Y693 200 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 ADGRL3Q9HAR2 1447 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 UBR4Q5T4S7 5183 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 HECW2Q9P2P5 1572 aa0.96□□□□□ -2.26
TOPBP1-204ENST00000505804 CLDN24A6NM45 220 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 SDCBPO00560 298 aaPredicted RBP0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 FADS1O60427 444 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 CD79AP11912 226 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 HSD11B1P28845 292 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 BASP1P80723 227 aaKnown RBP0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 PLCXD2Q0VAA5 305 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 NDUFA5Q16718 116 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 HIST2H3PS2Q5TEC6 136 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 ALKAL1Q6UXT8 129 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 DHFR2Q86XF0 187 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 LRRC25Q8N386 305 aaPredicted RBP0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 CLDN22Q8N7P3 220 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 CDC26Q8NHZ8 85 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 ROPN1LQ96C74 230 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 IL36BQ9NZH7 164 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 VPS29Q9UBQ0 182 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 HECW1Q76N89 1606 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 PIK3C2GO75747 1445 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 ERCC6L2Q5T890 1561 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 TONSLQ96HA7 1378 aa0.95□□□□□ -2.26
TOPBP1-204ENST00000505804 KIF1BO60333 1816 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 KIF13BQ9NQT8 1826 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 CHD8Q9HCK8 2581 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 A0A1B0GV50 99 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 PQLC2LA1A4F0 135 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 SMIM9A6NGZ8 99 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 EEF1E1-BLOC1S5C9J1V9 151 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 INMT-MINDY4F8WBC2 141 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 PSMD12O00232 456 aaPredicted RBP0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 NOS1APO75052 506 aaPredicted RBP0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 UBBP0CG47 229 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 NEFHP12036 1026 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 KCNE1P15382 129 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 S100A5P33763 92 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 CAPZBP47756 277 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 EIF2B2P49770 351 aaKnown RBP0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 SUPT4H1P63272 117 aaKnown RBP0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 PMAIP1Q13794 54 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 ACOT6Q3I5F7 207 aaPredicted RBP0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 AKIRIN2Q53H80 203 aa0.94□□□□□ -2.26
TOPBP1-204ENST00000505804 ZNF439Q8NDP4 499 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms