RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 IFNA1P01562 189 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 DEFA4P12838 97 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 ZFP36P26651 326 aaKnown RBP17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 CNTFRP26992 372 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 PSG5Q15238 335 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 TPTE2P1Q5T6R2 138 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 KIR3DL3Q8N743 410 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 IGFBPL1Q8WX77 278 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 KCNIP2Q9NS61 270 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 VAX2Q9UIW0 290 aa17.16■□□□□ 0.34
UBE2D3-216ENST00000503742 HTR1DP28221 377 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 PRSS8Q16651 343 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 TMEM144Q7Z5S9 345 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 MMD2Q8IY49 270 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 P2RX4Q99571 388 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 TMPRSS5Q9H3S3 457 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 DPM3Q9P2X0 92 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 ZNF98A6NK75 572 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 TMEM249Q2WGJ8 235 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 RBMS3Q6XE24 437 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 RNF5Q99942 180 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 SIGLEC9Q9Y336 463 aa17.15■□□□□ 0.34
UBE2D3-216ENST00000503742 USP24Q9UPU5 2620 aa17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 CRYBA1P05813 215 aa17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 RPL29P47914 159 aaKnown RBP17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 PAX2Q02962 417 aa17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 CD69Q07108 199 aa17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 KLRD1Q13241 179 aa17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 CACNA1BQ00975 2339 aa17.14■□□□□ 0.33
UBE2D3-216ENST00000503742 C7orf77A4D0Y5 90 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 RAB31Q13636 194 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 GAMTQ14353 236 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 SSMEM1Q8WWF3 244 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 TACC2O95359 2948 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 M0R036 132 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 GPX4P36969 197 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 RAB5BP61020 215 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 B2MP61769 119 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 PRR20EP86478 221 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 PRR20CP86479 221 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 PRR20DP86480 221 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 PRR20BP86481 221 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 PRR20AP86496 221 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 FAM90A2PQ658T7 463 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 STPG3Q8N7X2 389 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 CACNG8Q8WXS5 425 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 TUBA4BQ9H853 241 aa17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 PUS1Q9Y606 427 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBE2D3-216ENST00000503742 IGKV1OR2-108A0A075B7D4 117 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 TIMM23O14925 209 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 PLXNB1O43157 2135 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 SNRNP70P08621 437 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 MAS1LP35410 378 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 TAGLN2P37802 199 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 AKR1D1P51857 326 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 S100A12P80511 92 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 HABP2Q14520 560 aaPredicted RBP17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 MLANAQ16655 118 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 RNF212Q495C1 297 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 SLC35E3Q7Z769 313 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 C20orf24Q9BUV8 137 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 RPS10P5Q9NQ39 176 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 MANBALQ9NQG1 85 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 SLC45A2Q9UMX9 530 aa17.12■□□□□ 0.33
UBE2D3-216ENST00000503742 COLCA2A8K830 154 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 H3BQ15 152 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 CEBPGP53567 150 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 RHEBQ15382 184 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 AKIRIN2Q53H80 203 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 RNASEH2CQ8TDP1 164 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 CFHR4Q92496 578 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 BPESC1Q9GZL8 116 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 A0A1W2PPV4 95 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 IGLC7A0M8Q6 106 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 NDUFS6O75380 124 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 VENTXO95231 258 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 LINC00869P0C866 280 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 RNF224P0DH78 156 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 CEACAM3P40198 252 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 CD81P60033 236 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 LMO4P61968 165 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 VMO1Q7Z5L0 202 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 PPP1R27Q86WC6 154 aa17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 METTL1Q9UBP6 276 aaKnown RBP17.11■□□□□ 0.33
UBE2D3-216ENST00000503742 AKR1C3P42330 323 aa17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 RPL35P42766 123 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 RPL27AP46776 148 aaKnown RBP17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 PSMB3P49720 205 aa17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 COMPP49747 757 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 SUB1P53999 127 aaKnown RBP eCLIP17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 MEF2BQ02080 365 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 PVRIGQ6DKI7 326 aa17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 SLC16A13Q7RTY0 426 aa17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 LHFPL4Q7Z7J7 247 aa17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 SIRPDQ9H106 197 aa17.1■□□□□ 0.33
UBE2D3-216ENST00000503742 IGHV4-39P01824 125 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 TNXAQ16473 311 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 GATAD1Q8WUU5 269 aa17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 BBC3Q96PG8 261 aaPredicted RBP17.09■□□□□ 0.33
UBE2D3-216ENST00000503742 NAV3Q8IVL0 2385 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms