RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 RAB32Q13637 225 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 PDLIM3Q53GG5 364 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-227ENST00000498056 CTRB2Q6GPI1 263 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 LCNL1Q6ZST4 164 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 OR2C3Q8N628 320 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 SLC24A4Q8NFF2 622 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 OR5AU1Q8NGC0 362 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 MS4A10Q96PG2 267 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 NMES1Q9C002 83 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 HIPK2Q9H2X6 1198 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 PAIP2BQ9ULR5 123 aaKnown RBP10.62□□□□□ -0.71
CPNE1-227ENST00000498056 K7EPK0 472 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 IFNA10P01566 189 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 IGHG4P01861 327 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 TRGV3P03979 118 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 PPIFP30405 207 aaKnown RBP10.61□□□□□ -0.71
CPNE1-227ENST00000498056 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 TMEM65Q6PI78 240 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 TTC9CQ8N5M4 171 aa10.61□□□□□ -0.71
CPNE1-227ENST00000498056 WDR89Q96FK6 387 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-227ENST00000498056 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-227ENST00000498056 ZNF436Q9C0F3 470 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-227ENST00000498056 F11RQ9Y624 299 aaKnown RBP10.61□□□□□ -0.71
CPNE1-227ENST00000498056 H3BUA1 57 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 L7N2F9 121 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 CYB5BO43169 146 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 OR2J3O76001 311 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 CRYGCP07315 174 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 NPY1RP25929 384 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 VAMP2P63027 116 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 CYCSP99999 105 aaKnown RBP10.6□□□□□ -0.71
CPNE1-227ENST00000498056 ID3Q02535 119 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 FOXE3Q13461 319 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 C12orf54Q6X4T0 127 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 COMMD1Q8N668 190 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 ZNF114Q8NC26 417 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 MISP3Q96FF7 219 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 P2RX4Q99571 388 aa10.6□□□□□ -0.71
CPNE1-227ENST00000498056 A0A1B0GVG6 124 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 INS-IGF2F8WCM5 200 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 IGLV1-40P01703 118 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 RPLP1P05386 114 aaKnown RBP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 ELANEP08246 267 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 GIPP09681 153 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 PET100P0DJ07 73 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 CD28P10747 220 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 PVALBP20472 110 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 PSMB8P28062 276 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 HTR2BP41595 481 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 SUB1P53999 127 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 RHOGP84095 191 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 CD83Q01151 205 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 SPANXN5Q5MJ07 72 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 SLC25A24Q6NUK1 477 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 WIPF2Q8TF74 440 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 PPP1R1CQ8WVI7 109 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 PINX1Q96BK5 328 aaKnown RBP10.59□□□□□ -0.71
CPNE1-227ENST00000498056 SLA2Q9H6Q3 261 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 ZFP57Q9NU63 452 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 PSENENQ9NZ42 101 aa10.59□□□□□ -0.71
CPNE1-227ENST00000498056 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 OR8U8P0C7N1 319 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 MFAP2P55001 183 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 SRSF4Q08170 494 aaKnown RBP10.58□□□□□ -0.72
CPNE1-227ENST00000498056 OR1P1Q8NH06 330 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 RAB40CQ96S21 281 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 KLK15Q9H2R5 256 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
CPNE1-227ENST00000498056 IGHV3-21A0A0B4J1V1 117 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 TCRBV4S1A1TA0A5B7 111 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 FAM223BA6NKX1 122 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 NUDT19A8MXV4 375 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 DEDDO75618 318 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 HIST1H1BP16401 226 aaKnown RBP10.57□□□□□ -0.72
CPNE1-227ENST00000498056 OPRK1P41145 380 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 RAB9AP51151 201 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 BCAP31P51572 246 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 CAV2P51636 162 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 KRTAP10-3P60369 221 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
CPNE1-227ENST00000498056 RPP30P78346 268 aaKnown RBP10.57□□□□□ -0.72
CPNE1-227ENST00000498056 IL15RAQ13261 267 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 EXOSC2Q13868 293 aaKnown RBP10.57□□□□□ -0.72
CPNE1-227ENST00000498056 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 FAM223AQ8IWN6 122 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 C3orf56Q8N813 242 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 OR1L6Q8NGR2 347 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 OR5B12Q96R08 314 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 OR4C12Q96R67 309 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 CITED2Q99967 270 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-227ENST00000498056 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 THYN1Q9P016 225 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 MBD2Q9UBB5 411 aa10.57□□□□□ -0.72
CPNE1-227ENST00000498056 STRAPQ9Y3F4 350 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms