RNA–Protein interactions for RNA: ENST00000497289.5

RPN1-207, Transcript of ribophorin I, humanhuman

TSL 2 BASIC

Gene RPN1, Length 2,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-207ENST00000497289 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 RAB31Q13636 194 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 HAGHQ16775 308 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 ZNF506Q5JVG8 444 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 FAM122CQ6P4D5 195 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 CLEC2AQ6UVW9 174 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 PPP1R27Q86WC6 154 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.68□□□□□ -0.38
RPN1-207ENST00000497289 C10orf105Q8TEF2 133 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 RARRES2Q99969 163 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 CYB5BO43169 146 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 SNAPINO95295 136 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
RPN1-207ENST00000497289 ATRAIDQ6UW56 229 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 SLC35B3Q9H1N7 401 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 ZNF462Q96JM2 2506 aa12.68□□□□□ -0.38
RPN1-207ENST00000497289 OR13C7P0DN81 318 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 CD69Q07108 199 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 SRSF1Q07955 248 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPN1-207ENST00000497289 BTN1A1Q13410 526 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 FBXL15Q9H469 300 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 POLR3KQ9Y2Y1 108 aaPredicted RBP12.67□□□□□ -0.38
RPN1-207ENST00000497289 PXMP4Q9Y6I8 212 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 MOSP00540 346 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 IFNA1P01562 189 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
RPN1-207ENST00000497289 COMPP49747 757 aaPredicted RBP12.67□□□□□ -0.38
RPN1-207ENST00000497289 ICAM4Q14773 271 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 PLGLAQ15195 96 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 RNASEH2CQ8TDP1 164 aaKnown RBP12.67□□□□□ -0.38
RPN1-207ENST00000497289 C1orf159Q96HA4 380 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 TBX15Q96SF7 602 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 GNG13Q9P2W3 67 aa12.67□□□□□ -0.38
RPN1-207ENST00000497289 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
RPN1-207ENST00000497289 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
RPN1-207ENST00000497289 GPX4P36969 197 aaPredicted RBP12.66□□□□□ -0.38
RPN1-207ENST00000497289 GNB1P62873 340 aa12.66□□□□□ -0.38
RPN1-207ENST00000497289 MMDQ15546 238 aa12.66□□□□□ -0.38
RPN1-207ENST00000497289 KHDC3LQ587J8 217 aa12.66□□□□□ -0.38
RPN1-207ENST00000497289 TMEM144Q7Z5S9 345 aa12.66□□□□□ -0.38
RPN1-207ENST00000497289 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
RPN1-207ENST00000497289 USP9XQ93008 2570 aaPredicted RBP12.66□□□□□ -0.38
RPN1-207ENST00000497289 NBR2O15453 112 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 HSPB1P04792 205 aaKnown RBP12.65□□□□□ -0.38
RPN1-207ENST00000497289 UBE2E1P51965 193 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 SSX2Q16385 188 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 MIC13Q5XKP0 118 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 SLC16A13Q7RTY0 426 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 SLC35E1Q96K37 410 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 P2RX4Q99571 388 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 SEC14L6B5MCN3 397 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 BCL2P10415 239 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 GAMTQ14353 236 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 ZNF114Q8NC26 417 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 NPBQ8NG41 125 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 OR2T10Q8NGZ9 312 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 RXFP4Q8TDU9 374 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 SSMEM1Q8WWF3 244 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 RAB24Q969Q5 203 aa12.65□□□□□ -0.38
RPN1-207ENST00000497289 YIF1AO95070 293 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 SRP19P09132 144 aaKnown RBP12.64□□□□□ -0.39
RPN1-207ENST00000497289 RPL29P47914 159 aaKnown RBP12.64□□□□□ -0.39
RPN1-207ENST00000497289 B2MP61769 119 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 PMS2P11Q13670 270 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 HES1Q14469 280 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
RPN1-207ENST00000497289 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 IGHV4-61A0A0C4DH41 118 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 LOC105371267A0A1B0GV96 52 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 A0A1W2PPV4 95 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 NDUFA3O95167 84 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 REG1AP05451 166 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 SNRNP70P08621 437 aaKnown RBP12.64□□□□□ -0.39
RPN1-207ENST00000497289 DYNAPQ8N1N2 210 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 STPG3Q8N7X2 389 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 PERPQ96FX8 193 aa12.64□□□□□ -0.39
RPN1-207ENST00000497289 UBR5O95071 2799 aaPredicted RBP12.63□□□□□ -0.39
RPN1-207ENST00000497289 A1L4Q6 167 aa12.63□□□□□ -0.39
RPN1-207ENST00000497289 TSPAN4O14817 238 aa12.63□□□□□ -0.39
RPN1-207ENST00000497289 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
RPN1-207ENST00000497289 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPN1-207ENST00000497289 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
RPN1-207ENST00000497289 RBMS3Q6XE24 437 aaKnown RBP12.63□□□□□ -0.39
RPN1-207ENST00000497289 SRSF12Q8WXF0 261 aaKnown RBP12.63□□□□□ -0.39
RPN1-207ENST00000497289 MYO18BQ8IUG5 2567 aa12.63□□□□□ -0.39
RPN1-207ENST00000497289 COL12A1Q99715 3063 aa12.63□□□□□ -0.39
RPN1-207ENST00000497289 KMT2BQ9UMN6 2715 aaPredicted RBP12.62□□□□□ -0.39
RPN1-207ENST00000497289 PAX1P15863 534 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 PAX6P26367 422 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 NPBWR1P48145 328 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 CLRN3Q8NCR9 226 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 MALSU1Q96EH3 234 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 TEX22C9J3V5 150 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 AREGP15514 252 aa12.62□□□□□ -0.39
RPN1-207ENST00000497289 TAGLN2P37802 199 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms