RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SLAMF6Q96DU3 332 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 PPP3R2Q96LZ3 170 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 FAM60AQ9NP50 221 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 OTORQ9NRC9 128 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 MRPL16Q9NX20 251 aaKnown RBP4.67□□□□□ -1.66
SNX13-210ENST00000494402 CELA1Q9UNI1 258 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 HEY1Q9Y5J3 304 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 PHLDA3Q9Y5J5 127 aa4.67□□□□□ -1.66
SNX13-210ENST00000494402 ZNFX1Q9P2E3 1918 aaKnown RBP4.67□□□□□ -1.66
SNX13-210ENST00000494402 A0A0J9YWU9 116 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 J3QQQ9 107 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 RBFOX2O43251 390 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNX13-210ENST00000494402 CD28P10747 220 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 NTF3P20783 257 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 S100A4P26447 101 aaKnown RBP4.66□□□□□ -1.66
SNX13-210ENST00000494402 CSN1S1P47710 185 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 CXCL12P48061 93 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 SYCNQ0VAF6 134 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 SP6Q3SY56 376 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 VMA21Q3ZAQ7 101 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 AADACL3Q5VUY0 350 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 PACRGLQ8N7B6 248 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.66□□□□□ -1.66
SNX13-210ENST00000494402 OR11G2Q8NGC1 345 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 PPTC7Q8NI37 304 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 RNASE6Q93091 150 aaKnown RBP4.66□□□□□ -1.66
SNX13-210ENST00000494402 VGLL1Q99990 258 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 IL36BQ9NZH7 164 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 FUT9Q9Y231 359 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 TMEM14AQ9Y6G1 99 aa4.66□□□□□ -1.66
SNX13-210ENST00000494402 DICER1Q9UPY3 1922 aaKnown RBP4.66□□□□□ -1.66
SNX13-210ENST00000494402 ZNF106Q9H2Y7 1883 aaKnown RBP4.65□□□□□ -1.66
SNX13-210ENST00000494402 CAMSAP2Q08AD1 1489 aa4.65□□□□□ -1.66
SNX13-210ENST00000494402 IRGMA1A4Y4 181 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 GGCTO75223 188 aaKnown RBP4.65□□□□□ -1.67
SNX13-210ENST00000494402 INSL3P51460 131 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 NDUFA6P56556 154 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 GNG2P59768 71 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 MAXP61244 160 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 PSG7Q13046 419 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 BIKQ13323 160 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 IL17AQ16552 155 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 Q5XG85 94 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 IFT20Q8IY31 132 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 C10orf126Q8N4M7 172 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 OR51A4Q8NGJ6 313 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 OR2T10Q8NGZ9 312 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 CIRBP-AS1Q8TBR5 109 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 DERL1Q9BUN8 251 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 TCEAL2Q9H3H9 227 aaPredicted RBP4.65□□□□□ -1.67
SNX13-210ENST00000494402 LOXHD1Q8IVV2 1947 aa4.65□□□□□ -1.67
SNX13-210ENST00000494402 C20orf202A1L168 122 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 PAEPP09466 180 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 LGALS3P17931 250 aaKnown RBP4.64□□□□□ -1.67
SNX13-210ENST00000494402 NPPCP23582 126 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 MSMO1Q15800 293 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 LGALS9BQ3B8N2 356 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 BCL2L15Q5TBC7 163 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 LGALS9CQ6DKI2 356 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 ZNF586Q9NXT0 402 aa4.64□□□□□ -1.67
SNX13-210ENST00000494402 DISP2A7MBM2 1401 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 VPS8Q8N3P4 1428 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 HCFC1P51610 2035 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 ADAMTSL1Q8N6G6 1762 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 RALGAPA2Q2PPJ7 1873 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 PVALEFA0A1B0GWK0 134 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 MEIS3P1A6NDR6 274 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 ZNF860A6NHJ4 632 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 C1orf196B1AJZ1 125 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 HRASP01112 189 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 KRASP01116 189 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 IGHV1-46P01743 117 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 CRYBB3P26998 211 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 SDC2P34741 201 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 TGFBR1P36897 503 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 TAS2R20P59543 309 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 COPZ1P61923 177 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 MRPS21P82921 87 aaKnown RBP4.63□□□□□ -1.67
SNX13-210ENST00000494402 MRPL51Q4U2R6 128 aaKnown RBP4.63□□□□□ -1.67
SNX13-210ENST00000494402 AMMECR1LQ6DCA0 310 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 NR2C2APQ86WQ0 139 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 MSRB3Q8IXL7 192 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 RPP25LQ8N5L8 163 aaKnown RBP4.63□□□□□ -1.67
SNX13-210ENST00000494402 ZFAND2AQ8N6M9 145 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 OR4S1Q8NGB4 309 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 SLC25A46Q96AG3 418 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 ZNF799Q96GE5 643 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 GABARAPL1Q9H0R8 117 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 TAF9BQ9HBM6 251 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 ZNF222Q9UK12 451 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 MCTS1Q9ULC4 181 aaKnown RBP4.63□□□□□ -1.67
SNX13-210ENST00000494402 ADGBQ8N7X0 1667 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 NALCNQ8IZF0 1738 aa4.63□□□□□ -1.67
SNX13-210ENST00000494402 IGKV2D-30A0A075B6S6 120 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 FAM168BA1KXE4 195 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 BUB1B-PAK6H3BSN5 160 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 M0R378 163 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 OR2T1O43869 369 aa4.62□□□□□ -1.67
SNX13-210ENST00000494402 CST7O76096 145 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms