RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 ARPC4P59998 168 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 RPL11P62913 178 aaKnown RBP7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 SRSF3P84103 164 aaKnown RBP7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 CATR1Q13166 79 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 TIMM50Q3ZCQ8 353 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 CNIH2Q6PI25 160 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 SPAG16Q8N0X2 631 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 GBGT1Q8N5D6 347 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 POM121L12Q8N7R1 296 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 GDPD1Q8N9F7 314 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 ZBTB34Q8NCN2 500 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 GFI1Q99684 422 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 RNF126Q9BV68 326 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 ACOT13Q9NPJ3 140 aa7.11□□□□□ -1.27
TNFRSF9-203ENST00000492571 A0A1B0GVY2 172 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 M0R2N4 97 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 UPK2O00526 184 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 CHEK1O14757 476 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 HPRT1P00492 218 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 IFNA10P01566 189 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 FGF2P09038 288 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 NPY1RP25929 384 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 ERVK-16P61578 105 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 CDNFQ49AH0 187 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 TMEM91Q6ZNR0 172 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 OR1L8Q8NGR8 309 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 SCARB1Q8WTV0 552 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 GINS3Q9BRX5 216 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 NDUFAF3Q9BU61 184 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 HINT2Q9BX68 163 aa7.1□□□□□ -1.27
TNFRSF9-203ENST00000492571 IGKV1D-8A0A087WSZ0 117 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 IGHV3-21A0A0B4J1V1 117 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 CASQ2O14958 399 aaPredicted RBP7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 RBFOX2O43251 390 aaKnown RBP eCLIP7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 TNFSF12O43508 249 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 SCGNO76038 276 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 IGLV2-14P01704 120 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 GNG2P59768 71 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 RCN1Q15293 331 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 MSMO1Q15800 293 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 HACD4Q5VWC8 232 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 MORN3Q6PF18 240 aaPredicted RBP7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 Q6ZTC4 211 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 DUSP18Q8NEJ0 188 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 OR10W1Q8NGF6 305 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 SECTM1Q8WVN6 248 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 BORCS5Q969J3 196 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 LSM10Q969L4 123 aaKnown RBP7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 TMEM56Q96MV1 263 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 CHRDL1Q9BU40 450 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 FKBP14Q9NWM8 211 aa7.09□□□□□ -1.27
TNFRSF9-203ENST00000492571 DEFB131BA0A096LNP1 70 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 IGHV3-49A0A0A0MS15 119 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 IGKV1D-13A0A0B4J2D9 117 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 CGB1A6NKQ9 187 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 IFITM5A6NNB3 132 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 SULT1C2O00338 296 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 ST8SIA3O43173 380 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 SNAPC5O75971 98 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 GNAO1P09471 354 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 IGKV1-13P0DP09 117 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 SPP1P10451 314 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 MYL9P24844 172 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 BRWD1-AS2P59051 145 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 DEFB131AP59861 70 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 RPS25P62851 125 aaKnown RBP7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 LGALS9BQ3B8N2 356 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 LEMD1Q68G75 181 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 UBE2DNLQ8IWF7 75 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 Q8NAQ8 132 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 TSPAN14Q8NG11 270 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 GIMAP1Q8WWP7 306 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 DGCR14Q96DF8 476 aaKnown RBP7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 TXN2Q99757 166 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 VCXQ9H320 206 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 TMEM231Q9H6L2 316 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 PLEKHA2Q9HB19 425 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 TMEM140Q9NV12 185 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 ANXA10Q9UJ72 324 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 TPRKBQ9Y3C4 175 aa7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 F11RQ9Y624 299 aaKnown RBP7.08□□□□□ -1.28
TNFRSF9-203ENST00000492571 TEX50A0A1B0GTY4 177 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 RTL8CO15255 209 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 CTSGP08311 255 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 RAB3BP20337 219 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 FCGR2CP31995 323 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 MFAP4P55083 255 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 MLLT11Q13015 90 aaPredicted RBP7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 EIF4EBP1Q13541 118 aaPredicted RBP7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 POU2AF1Q16633 256 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 LAIR2Q6ISS4 152 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 TPRA1Q86W33 373 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 OR13F1Q8NGS4 319 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 OR10C1Q96KK4 312 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 GPHA2Q96T91 129 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 SLC5A7Q9GZV3 580 aa7.07□□□□□ -1.28
TNFRSF9-203ENST00000492571 MS4A6AQ9H2W1 248 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms