RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 RTL8BQ17RB0 113 aa12.52□□□□□ -0.4
TNFRSF1B-203ENST00000492361 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.4
TNFRSF1B-203ENST00000492361 ANAPC16Q96DE5 110 aa12.52□□□□□ -0.4
TNFRSF1B-203ENST00000492361 PRO3102Q9H379 93 aa12.52□□□□□ -0.4
TNFRSF1B-203ENST00000492361 S4R3C0 116 aa12.52□□□□□ -0.4
TNFRSF1B-203ENST00000492361 RELNP78509 3460 aa12.52□□□□□ -0.4
TNFRSF1B-203ENST00000492361 TGIF2LXQ8IUE1 241 aa12.52□□□□□ -0.41
TNFRSF1B-203ENST00000492361 NABP2Q9BQ15 211 aa12.52□□□□□ -0.41
TNFRSF1B-203ENST00000492361 PARD6AQ9NPB6 346 aa12.52□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 PDE6DO43924 150 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 HSPE1P61604 102 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TRAT1Q6PIZ9 186 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ASCL2Q99929 193 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 DSCAMO60469 2012 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 F2Z2F3 143 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 PYYP10082 97 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 LEMD1Q68G75 181 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 FAM19A2Q8N3H0 131 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SLC25A17O43808 307 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 MOSP00540 346 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ZNF883P0CG24 379 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 RELBQ01201 579 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 DIAPH2-AS1Q14236 149 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 IFI27L2Q9H2X8 130 aa12.51□□□□□ -0.41
TNFRSF1B-203ENST00000492361 NPIPB11E5RHQ5 1161 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 C15orf65H3BRN8 121 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 RND2P52198 227 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SRRM5B3KS81 715 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 AMTP48728 403 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ZNF600Q6ZNG1 722 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 MRPL20Q9BYC9 149 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 CACNA1AO00555 2505 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 COX7A2P2O60397 106 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TNFSF13O75888 250 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 APOA2P02652 100 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SLC35E1Q96K37 410 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SLC25A10Q9UBX3 287 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 JPT1Q9UK76 154 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
TNFRSF1B-203ENST00000492361 PMS2P5A8MQ11 134 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 OR1B1Q8NGR6 318 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 GSX1Q9H4S2 264 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ZNF253O75346 499 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 DBX2Q6ZNG2 339 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SAP30LQ9HAJ7 183 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SRRM4A7MD48 611 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SERF1AO75920 110 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 MMD2Q8IY49 270 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
TNFRSF1B-203ENST00000492361 LINC00869P0C866 280 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 CD24P25063 80 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 IQCJQ1A5X6 159 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SIGLECL1Q8N7X8 197 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SLC25A15Q9Y619 301 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 KBTBD11-OT1A0A1B0GTJ5 212 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TGOLN2O43493 480 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 GPR6P46095 362 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ERHP84090 104 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 NEUROG1Q92886 237 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ZNF137PP52743 207 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TCTAP57738 103 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 GNG5P63218 68 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TMEM170AQ8WVE7 144 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 DKK4Q9UBT3 224 aa12.48□□□□□ -0.41
TNFRSF1B-203ENST00000492361 IGHV1-46P01743 117 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 RAB7AP51149 207 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TDRG1Q3Y452 100 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 KRTCAP3Q53RY4 240 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 RPEL1Q2QD12 228 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TEX38Q6PEX7 206 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
TNFRSF1B-203ENST00000492361 HOXB1P14653 301 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 GFRALQ6UXV0 394 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 WNT10AQ9GZT5 417 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 IDI2-AS1Q9NZ38 188 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 NKX6-3A6NJ46 265 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 PRRG2O14669 202 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 TNXAQ16473 311 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 HES4Q9HCC6 221 aa12.46□□□□□ -0.41
TNFRSF1B-203ENST00000492361 hADV38S2A0JD32 116 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 A6NNC1 897 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 EREGO14944 169 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 GLRXP35754 106 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 CASP6P55212 293 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 REC114Q7Z4M0 266 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 FLYWCH2Q96CP2 140 aaKnown RBP12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 NAGKQ9UJ70 344 aa12.46□□□□□ -0.42
TNFRSF1B-203ENST00000492361 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms