RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 LIMS3P0CW19 117 aa10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 LIMS4P0CW20 117 aa10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 TTC23Q5W5X9 447 aa10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 OR52I1Q8NGK6 324 aa10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 AMBNQ9NP70 447 aa10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
SDHAF3-204ENST00000489852 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 A0A1W2PS18 150 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 DEFB130BP0DP73 79 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 DEFB130AP0DP74 79 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 DCKP27707 260 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 MFAP4P55083 255 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 BRWD1-AS2P59051 145 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 RRN3P1Q2M238 152 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 THOC7Q6I9Y2 204 aaKnown RBP10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 HSD17B13Q7Z5P4 300 aaPredicted RBP10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 H1FOOQ8IZA3 346 aaPredicted RBP10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 RNF125Q96EQ8 232 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 Q96MT0 163 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 PECRQ9BY49 303 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 LPAR5Q9H1C0 372 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
SDHAF3-204ENST00000489852 TMEM14DPA8MWL7 114 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 TRAPPC2P0DI81 140 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 TRAPPC2BP0DI82 140 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 TMEM50BP56557 158 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 MRPS15P82914 257 aaKnown RBP10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 QRFPP83859 136 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 DHRS2Q13268 280 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 SLC25A46Q96AG3 418 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 DERL3Q96Q80 235 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 HSD17B10Q99714 261 aaKnown RBP10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 TXN2Q99757 166 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 C7orf50Q9BRJ6 194 aaKnown RBP10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 AIFM2Q9BRQ8 373 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 URM1Q9BTM9 101 aaKnown RBP10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 GOLT1BQ9Y3E0 138 aa10.01□□□□□ -0.81
SDHAF3-204ENST00000489852 DNAH8Q96JB1 4490 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 UPK2O00526 184 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 GNG7O60262 68 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 CDK1P06493 297 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 NPPCP23582 126 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 P2RY1P47900 373 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 ESRGQ1W209 222 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 HSP90B2PQ58FF3 399 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 RBM48Q5RL73 367 aaKnown RBP10□□□□□ -0.81
SDHAF3-204ENST00000489852 FAM89BQ8N5H3 189 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 BABAM2Q9NXR7 383 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
SDHAF3-204ENST00000489852 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
SDHAF3-204ENST00000489852 TCRBV3S1A0A5B6 114 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 FOXI3A8MTJ6 420 aaPredicted RBP9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 IGKV3-20P01619 116 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 IGLV2-14P01704 120 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 ATP5G1P05496 136 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 HLA-DRB4P13762 266 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 ATP5G3P48201 142 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 HOXA1P49639 335 aaPredicted RBP9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 KCTD21Q4G0X4 260 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 TMPRSS11AQ6ZMR5 421 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 MAFIPQ8WZ33 124 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 PGLYRP3Q96LB9 341 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 HLA-DRB4X5D2U9 266 aa9.99□□□□□ -0.81
SDHAF3-204ENST00000489852 IGLV5-52A0A0A0MRZ9 124 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 SLC22A5O76082 557 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 BPNT1O95861 308 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 LALBAP00709 142 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 IGHV3-48P01763 117 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 FCGR3AP08637 254 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 CD37P11049 281 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 FLOT2Q14254 428 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 C1orf100Q5SVJ3 147 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 ZFP41Q8N8Y5 198 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 MOB3AQ96BX8 217 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 HINT2Q9BX68 163 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 TAS2R8Q9NYW2 309 aa9.98□□□□□ -0.81
SDHAF3-204ENST00000489852 TEX50A0A1B0GTY4 177 aa9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 EIF2B2P49770 351 aaKnown RBP9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 ETV1P50549 477 aa9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 EIF4EBP1Q13541 118 aaPredicted RBP9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 PLAC9Q5JTB6 97 aa9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 ZNF600Q6ZNG1 722 aa9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 FAM107BQ9H098 131 aa9.97□□□□□ -0.81
SDHAF3-204ENST00000489852 I3L2K1 104 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 OR1L8Q8NGR8 309 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 LSM10Q969L4 123 aaKnown RBP9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 GNPNAT1Q96EK6 184 aaPredicted RBP9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 MISP3Q96FF7 219 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 METTL26Q96S19 204 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 GPHA2Q96T91 129 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 CENPOQ9BU64 300 aa9.96□□□□□ -0.82
SDHAF3-204ENST00000489852 OR2W1Q9Y3N9 320 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms