RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 VSIRQ9H7M9 311 aa16.16■□□□□ 0.18
ATP1A1-208ENST00000488733 KIAA1456Q9P272 454 aa16.16■□□□□ 0.18
ATP1A1-208ENST00000488733 FAM96BQ9Y3D0 163 aa16.16■□□□□ 0.18
ATP1A1-208ENST00000488733 A0A1W2PRD5 423 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 A0A1W2PRF3 423 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 A0A1W2PRM7 423 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 FAM157AC9JC47 383 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 E7EUB6 86 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 RPL27AP46776 148 aaKnown RBP16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 RAB31Q13636 194 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 SSX2Q16385 188 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 TNXAQ16473 311 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 TEPPQ6URK8 271 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 OR2T10Q8NGZ9 312 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 CACNG8Q8WXS5 425 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 MALSU1Q96EH3 234 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 EIF5A2Q9GZV4 153 aaKnown RBP16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 TMEM231Q9H6L2 316 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 TNCP24821 2201 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 MED13LQ71F56 2210 aa16.15■□□□□ 0.18
ATP1A1-208ENST00000488733 SLC25A16P16260 332 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 GPX4P36969 197 aaPredicted RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 OPRK1P41145 380 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 COMPP49747 757 aaPredicted RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 ACOT6Q3I5F7 207 aaPredicted RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 ARSJQ5FYB0 599 aaPredicted RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 C10orf55Q5SWW7 151 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 ACSM6Q6P461 480 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 NPBQ8NG41 125 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 RNASEH2CQ8TDP1 164 aaKnown RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 MBD6Q96DN6 1003 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 RCC1LQ96I51 464 aaKnown RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 SCRT1Q9BWW7 348 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 LSM4Q9Y4Z0 139 aaKnown RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 CSMD2Q7Z408 3487 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 IGKV1D-33P01593 117 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 IGKV1-33P01594 117 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 APOC3P02656 99 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 SNRNP70P08621 437 aaKnown RBP16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 OR13C7P0DN81 318 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 WT1-ASQ06250 92 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 PAX8Q06710 450 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 HNF4GQ14541 408 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 C10orf91Q5T1B1 145 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 SEC11CQ9BY50 192 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 FBXL15Q9H469 300 aa16.14■□□□□ 0.17
ATP1A1-208ENST00000488733 F8W036 122 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 NBR2O15453 112 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 M6PRP20645 277 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 PLGLAQ15195 96 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 MMDQ15546 238 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 RPP25LQ8N5L8 163 aaKnown RBP16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 OR10G4Q8NGN3 311 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 OR10G9Q8NGN4 311 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 OR10G7Q8NGN6 311 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 EAF1Q96JC9 268 aaPredicted RBP16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 ACTR3CQ9C0K3 210 aaPredicted RBP16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 SLC39A9Q9NUM3 307 aa16.13■□□□□ 0.17
ATP1A1-208ENST00000488733 A0A1B0GV50 99 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 CYB5BO43169 146 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 NDUFA3O95167 84 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 CCL20P78556 96 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 CD69Q07108 199 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 EBI3Q14213 229 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 ZNF726P1Q15940 193 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 TMEM144Q7Z5S9 345 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 MGST2Q99735 147 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 SRSF8Q9BRL6 282 aaKnown RBP16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 CARHSP1Q9Y2V2 147 aaKnown RBP16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 UNC79Q9P2D8 2635 aa16.12■□□□□ 0.17
ATP1A1-208ENST00000488733 IGLC7A0M8Q6 106 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 RBFOX3A6NFN3 312 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 ZNF114Q8NC26 417 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 GGTLC1Q9BX51 225 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 CTXND1A0A1B0GTU2 59 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 SFTA3P0C7M3 94 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 HES1Q14469 280 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 Q5PR19 223 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 P2RX4Q99571 388 aa16.11■□□□□ 0.17
ATP1A1-208ENST00000488733 MAP1LC3B2A6NCE7 125 aa16.1■□□□□ 0.17
ATP1A1-208ENST00000488733 GNB1P62873 340 aa16.1■□□□□ 0.17
ATP1A1-208ENST00000488733 PMS2P11Q13670 270 aa16.1■□□□□ 0.17
ATP1A1-208ENST00000488733 LCN15Q6UWW0 184 aa16.1■□□□□ 0.17
ATP1A1-208ENST00000488733 DYNAPQ8N1N2 210 aa16.1■□□□□ 0.17
ATP1A1-208ENST00000488733 MAP1LC3BQ9GZQ8 125 aa16.1■□□□□ 0.17
ATP1A1-208ENST00000488733 BRS3P32247 399 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 RPL29P47914 159 aaKnown RBP16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 DEFA5Q01523 94 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 GAMTQ14353 236 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 PVRIGQ6DKI7 326 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 SVBPQ8N300 66 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 C1orf159Q96HA4 380 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 SLC35E1Q96K37 410 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 PXMP4Q9Y6I8 212 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 HECTD1Q9ULT8 2610 aa16.09■□□□□ 0.17
ATP1A1-208ENST00000488733 ABCA2Q9BZC7 2435 aa16.08■□□□□ 0.17
ATP1A1-208ENST00000488733 NPFFO15130 113 aa16.08■□□□□ 0.17
ATP1A1-208ENST00000488733 TSPAN9O75954 239 aa16.08■□□□□ 0.17
ATP1A1-208ENST00000488733 ADCYAP1P18509 176 aa16.08■□□□□ 0.17
ATP1A1-208ENST00000488733 SAA4P35542 130 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms