RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PFDN2Q9UHV9 154 aa10.2□□□□□ -0.78
NELFE-209ENST00000488426 HILPDAQ9Y5L2 63 aa10.2□□□□□ -0.78
NELFE-209ENST00000488426 LINC00587B1AMM8 73 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 TGFAP01135 160 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 CRYGBP07316 175 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 ATP6V0CP27449 155 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 MAS1LP35410 378 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 MEOX2P50222 304 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 RAB5CP51148 216 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 SRSF2Q01130 221 aaKnown RBP10.19□□□□□ -0.78
NELFE-209ENST00000488426 PSG5Q15238 335 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 SLC25A24Q6NUK1 477 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 THNSL2Q86YJ6 484 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 MMD2Q8IY49 270 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 SLC24A4Q8NFF2 622 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 SCGB1C1Q8TD33 95 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 SAV1Q9H4B6 383 aaPredicted RBP10.19□□□□□ -0.78
NELFE-209ENST00000488426 ZNF430Q9H8G1 570 aaPredicted RBP10.19□□□□□ -0.78
NELFE-209ENST00000488426 NDUFA4L2Q9NRX3 87 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 STAB1Q9NY15 2570 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 A0A1W2PN81 502 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 ZNF705EA8MWA4 302 aaPredicted RBP10.19□□□□□ -0.78
NELFE-209ENST00000488426 MYOD1P15172 320 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 NPY1RP25929 384 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 CHRNA7P36544 502 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 F2RL1P55085 397 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 VWC2Q2TAL6 325 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 LRRC75BQ2VPJ9 315 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 MALSU1Q96EH3 234 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 RITA1Q96K30 269 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 GGACTQ9BVM4 153 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 HINT2Q9BX68 163 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 SH3BGRL3Q9H299 93 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 UQCC1Q9NVA1 299 aa10.19□□□□□ -0.78
NELFE-209ENST00000488426 A0A1W2PRD5 423 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 A0A1W2PRF3 423 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 A0A1W2PRM7 423 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 UMAD1C9J7I0 102 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 DNASE2O00115 360 aaPredicted RBP10.18□□□□□ -0.78
NELFE-209ENST00000488426 MSMBP08118 114 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 BLOC1S1P78537 153 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 SSX2Q16385 188 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 PRSS8Q16651 343 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 ETV3LQ6ZN32 361 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 WDR61Q9GZS3 305 aaKnown RBP10.18□□□□□ -0.78
NELFE-209ENST00000488426 SIGLEC9Q9Y336 463 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 WNK2Q9Y3S1 2297 aa10.18□□□□□ -0.78
NELFE-209ENST00000488426 TNCP24821 2201 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 B4DSR2 109 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 RRHO14718 337 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 MOSP00540 346 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 MRGPRG-AS1Q2M3A8 158 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 MRPL41Q8IXM3 137 aaKnown RBP10.17□□□□□ -0.78
NELFE-209ENST00000488426 OR2G3Q8NGZ4 309 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 PSMG3Q9BT73 122 aaPredicted RBP10.17□□□□□ -0.78
NELFE-209ENST00000488426 TPSG1Q9NRR2 321 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 METTL1Q9UBP6 276 aaKnown RBP10.17□□□□□ -0.78
NELFE-209ENST00000488426 UBE2L5PA0A1B0GUS4 154 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 PRSS46E5RG02 174 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 NPFFO15130 113 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 OPN1MWP04001 364 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 OPN1MW2P0DN77 364 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 OPN1MW3P0DN78 364 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 GATA3P23771 443 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 CNTFRP26992 372 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 SAA4P35542 130 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 DLK1P80370 383 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 ERHP84090 104 aaKnown RBP10.17□□□□□ -0.78
NELFE-209ENST00000488426 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 FAM120AOSQ5T036 256 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 PPP1R27Q86WC6 154 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 NPBQ8NG41 125 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 OR2T10Q8NGZ9 312 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 TMEM170AQ8WVE7 144 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 TAF15Q92804 592 aaKnown RBP eCLIP10.17□□□□□ -0.78
NELFE-209ENST00000488426 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
NELFE-209ENST00000488426 TRAV20A0A0B4J274 112 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 NUDT19A8MXV4 375 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 ACTL6BO94805 426 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 NDUFA3O95167 84 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 CA2P00918 260 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 IGKV1D-33P01593 117 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 IGKV1-33P01594 117 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 IFNA4P05014 189 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 RUNX1Q01196 453 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 EBI3Q14213 229 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 TMEM182Q6ZP80 229 aaPredicted RBP10.16□□□□□ -0.78
NELFE-209ENST00000488426 HSD17B13Q7Z5P4 300 aaPredicted RBP10.16□□□□□ -0.78
NELFE-209ENST00000488426 DYNAPQ8N1N2 210 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
NELFE-209ENST00000488426 EAF1Q96JC9 268 aaPredicted RBP10.16□□□□□ -0.78
NELFE-209ENST00000488426 TIMM9Q9Y5J7 89 aa10.16□□□□□ -0.78
NELFE-209ENST00000488426 CGB1A6NKQ9 187 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 FNDC10F2Z333 226 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 NBR2O15453 112 aa10.15□□□□□ -0.78
NELFE-209ENST00000488426 SNCAP37840 140 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms