RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 ACOT6Q3I5F7 207 aaPredicted RBP16.37■□□□□ 0.21
PHF1-209ENST00000487667 TEPPQ6URK8 271 aa16.37■□□□□ 0.21
PHF1-209ENST00000487667 CFHR4Q92496 578 aa16.37■□□□□ 0.21
PHF1-209ENST00000487667 MALSU1Q96EH3 234 aa16.37■□□□□ 0.21
PHF1-209ENST00000487667 SMCO4Q9NRQ5 59 aa16.37■□□□□ 0.21
PHF1-209ENST00000487667 RPL27AP46776 148 aaKnown RBP16.36■□□□□ 0.21
PHF1-209ENST00000487667 PRB3Q04118 309 aaPredicted RBP16.36■□□□□ 0.21
PHF1-209ENST00000487667 OR2T10Q8NGZ9 312 aa16.36■□□□□ 0.21
PHF1-209ENST00000487667 EIF5A2Q9GZV4 153 aaKnown RBP16.36■□□□□ 0.21
PHF1-209ENST00000487667 CYB5BO43169 146 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 SNRNP70P08621 437 aaKnown RBP16.35■□□□□ 0.21
PHF1-209ENST00000487667 FFAR4Q5NUL3 377 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 SPSB3Q6PJ21 355 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 NPBQ8NG41 125 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 RITA1Q96K30 269 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 PRELID1Q9Y255 219 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 HILPDAQ9Y5L2 63 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 PPT1P50897 306 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 ACTR3CQ9C0K3 210 aaPredicted RBP16.35■□□□□ 0.21
PHF1-209ENST00000487667 MLXQ9UH92 298 aa16.35■□□□□ 0.21
PHF1-209ENST00000487667 LSM4Q9Y4Z0 139 aaKnown RBP16.35■□□□□ 0.21
PHF1-209ENST00000487667 LRRK2Q5S007 2527 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 SLC25A16P16260 332 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 ELLP55199 621 aaPredicted RBP16.34■□□□□ 0.21
PHF1-209ENST00000487667 PMS2P11Q13670 270 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 PLGLAQ15195 96 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 C15orf54Q8N8G6 183 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 ZNF114Q8NC26 417 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 RCC1LQ96I51 464 aaKnown RBP16.34■□□□□ 0.21
PHF1-209ENST00000487667 TBX15Q96SF7 602 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 SLC35B3Q9H1N7 401 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 TUBA4BQ9H853 241 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 SLC39A9Q9NUM3 307 aa16.34■□□□□ 0.21
PHF1-209ENST00000487667 CTXND1A0A1B0GTU2 59 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 NBR2O15453 112 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 TNXAQ16473 311 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 LDLRAD2Q5SZI1 272 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 TMEM144Q7Z5S9 345 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 LHFPL4Q7Z7J7 247 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 OR10W1Q8NGF6 305 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 OR10G4Q8NGN3 311 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 OR10G9Q8NGN4 311 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 OR10G7Q8NGN6 311 aa16.33■□□□□ 0.21
PHF1-209ENST00000487667 CORTO00230 105 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 NDUFA3O95167 84 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 OR13C7P0DN81 318 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 FOLR2P14207 255 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 TAGLN2P37802 199 aaKnown RBP16.33■□□□□ 0.2
PHF1-209ENST00000487667 PAX8Q06710 450 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 CD69Q07108 199 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 EBI3Q14213 229 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 MMDQ15546 238 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 SSX2Q16385 188 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 MRGPRG-AS1Q2M3A8 158 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 ARSJQ5FYB0 599 aaPredicted RBP16.33■□□□□ 0.2
PHF1-209ENST00000487667 ETFRF1Q6IPR1 90 aa16.33■□□□□ 0.2
PHF1-209ENST00000487667 IGHV4-61A0A0C4DH41 118 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 RBFOX3A6NFN3 312 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 IFNA1P01562 189 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 IGKV1D-33P01593 117 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 IGKV1-33P01594 117 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 BRS3P32247 399 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 WT1-ASQ06250 92 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 ZNF787Q6DD87 383 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 ACSM6Q6P461 480 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 SLC35E1Q96K37 410 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 UTP20O75691 2785 aaKnown RBP16.32■□□□□ 0.2
PHF1-209ENST00000487667 TNCP24821 2201 aa16.32■□□□□ 0.2
PHF1-209ENST00000487667 CGB1A6NKQ9 187 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 PERPQ96FX8 193 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 EAF1Q96JC9 268 aaPredicted RBP16.31■□□□□ 0.2
PHF1-209ENST00000487667 VSIRQ9H7M9 311 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 TPSG1Q9NRR2 321 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 MAP1LC3B2A6NCE7 125 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 RPL29P47914 159 aaKnown RBP16.31■□□□□ 0.2
PHF1-209ENST00000487667 RPP25LQ8N5L8 163 aaKnown RBP16.31■□□□□ 0.2
PHF1-209ENST00000487667 GGTLC1Q9BX51 225 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 MAP1LC3BQ9GZQ8 125 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 FBXL15Q9H469 300 aa16.31■□□□□ 0.2
PHF1-209ENST00000487667 COLCA2A8K830 154 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 FAM106CPP0CH98 169 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 CNTFRP26992 372 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 HES1Q14469 280 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 RHEBQ15382 184 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 KHDC3LQ587J8 217 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 PVRIGQ6DKI7 326 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 MGST2Q99735 147 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 C1RLQ9NZP8 487 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 ARHGAP32A7KAX9 2087 aa16.3■□□□□ 0.2
PHF1-209ENST00000487667 DCHS2Q6V1P9 2916 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 IGLC7A0M8Q6 106 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 SEC14L6B5MCN3 397 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 E7EUB6 86 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 ZNF506Q5JVG8 444 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 C10orf55Q5SWW7 151 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 RBMS3Q6XE24 437 aaKnown RBP16.29■□□□□ 0.2
PHF1-209ENST00000487667 OR1L6Q8NGR2 347 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 P2RX4Q99571 388 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 PXMP4Q9Y6I8 212 aa16.29■□□□□ 0.2
PHF1-209ENST00000487667 IGHV4-30-2A0A087WSY4 118 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms