RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ARL16Q0P5N6 197 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 ZNF383Q8NA42 475 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 VAMP8Q9BV40 100 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 PGPA6NDG6 321 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 C9JQL5 133 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 MT-ND6P03923 174 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 RNASEKQ6P5S7 137 aaKnown RBP9.77□□□□□ -0.85
TRA2B-214ENST00000487615 HEPN1Q6WQI6 88 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 NUP37Q8NFH4 326 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 OR1P1Q8NH06 330 aa9.77□□□□□ -0.85
TRA2B-214ENST00000487615 YLPM1P49750 1951 aaKnown RBP9.77□□□□□ -0.85
TRA2B-214ENST00000487615 LOC105371242A0A075B767 164 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 PAX9P55771 341 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 SLC35B1P78383 322 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 TBR1Q16650 682 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 TREML4Q6UXN2 200 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 MUC6Q6W4X9 2439 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 USF3Q68DE3 2245 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 IGKV1-39P01597 117 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 IGKV1D-39P04432 117 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 RPL29P47914 159 aaKnown RBP9.76□□□□□ -0.85
TRA2B-214ENST00000487615 PPOXP50336 477 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 MFAP2P55001 183 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 GCSAMLQ5JQS6 135 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 OR4A5Q8NH83 315 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 LPAR2Q9HBW0 351 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 SCO2A0A1W2PP80 73 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 SLC31A2O15432 143 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 WT1P19544 449 aaPredicted RBP9.76□□□□□ -0.85
TRA2B-214ENST00000487615 SPSB3Q6PJ21 355 aa9.76□□□□□ -0.85
TRA2B-214ENST00000487615 RNASEH2CQ8TDP1 164 aaKnown RBP9.76□□□□□ -0.85
TRA2B-214ENST00000487615 MOSP00540 346 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 GATA2P23769 480 aaPredicted RBP9.75□□□□□ -0.85
TRA2B-214ENST00000487615 LCN2P80188 198 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 CENPWQ5EE01 88 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 ZNF788Q6ZQV5 615 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 WFIKKN1Q96NZ8 548 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 GAFA1Q96PS6 74 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 FOXA2Q9Y261 457 aaPredicted RBP9.75□□□□□ -0.85
TRA2B-214ENST00000487615 ABCA1O95477 2261 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 ELOBQ15370 118 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 MIR17HGQ75NE6 70 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 TMEM133Q9H2Q1 129 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 ZNF257Q9Y2Q1 563 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
TRA2B-214ENST00000487615 BPIFA4PQ86YQ2 179 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 KLHDC1Q8N7A1 406 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 RBM14Q96PK6 669 aaKnown RBP9.75□□□□□ -0.85
TRA2B-214ENST00000487615 FBXL15Q9H469 300 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 BET1LQ9NYM9 111 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 DPM3Q9P2X0 92 aa9.75□□□□□ -0.85
TRA2B-214ENST00000487615 TRAV3A0A0B4J244 114 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 DPRXA6NFQ7 191 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 C1QTNF9BB2RNN3 333 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 FOLR2P14207 255 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 RELBQ01201 579 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 GAMTQ14353 236 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 ECSCRQ19T08 205 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 IGFL2Q6UWQ7 119 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 PARD6GQ9BYG4 376 aaPredicted RBP9.74□□□□□ -0.85
TRA2B-214ENST00000487615 GPX4P36969 197 aaPredicted RBP9.74□□□□□ -0.85
TRA2B-214ENST00000487615 ADIPOQQ15848 244 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 C15orf62A8K5M9 175 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 A8MWL6 223 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 ISLRO14498 428 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 CD69Q07108 199 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 FXYD3Q14802 87 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 TMEM183BQ1AE95 376 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 LINC00305Q7Z4B0 112 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 OR2D3Q8NGH3 330 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 RAXQ9Y2V3 346 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 PRR14LQ5THK1 2151 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 APCSP02743 223 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 FAM106CPP0CH98 169 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 EFNB3Q15768 340 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 C3orf36Q3SXR2 165 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 AARDQ4LEZ3 155 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 MED13LQ71F56 2210 aa9.74□□□□□ -0.85
TRA2B-214ENST00000487615 A0A087X0M5 115 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 A0A1B0GX30 115 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 FAM53AQ6NSI3 398 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-214ENST00000487615 FA2HQ7L5A8 372 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 NEU4Q8WWR8 484 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-214ENST00000487615 FAM215AQ9Y5M1 114 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 LYNX1G3V0Z9 82 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 ITGB1BP1O14713 200 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 GOSR1O95249 250 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 LYNX1P0DP58 116 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 CEACAM8P31997 349 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-214ENST00000487615 CFHR2P36980 270 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 NHLRC2Q8NBF2 726 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 TEX50A0A1B0GTY4 177 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 HLA-DQA1P01909 254 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 GATA4P43694 442 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
TRA2B-214ENST00000487615 TMEM242Q9NWH2 141 aa9.73□□□□□ -0.85
TRA2B-214ENST00000487615 ATXN7O15265 892 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms