RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RNASEK-C17orf49H0YIS7 233 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 RRHO14718 337 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 MYOD1P15172 320 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 PJVKQ0ZLH3 352 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 HABP2Q14520 560 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 TOR2AQ5JU69 321 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 LDLRAD2Q5SZI1 272 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 BTNL8Q6UX41 500 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 ZNF430Q9H8G1 570 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 NDUFA4L2Q9NRX3 87 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 TBL2Q9Y4P3 447 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 CUBNO60494 3623 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 TIMM23O14925 209 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 OPN1MWP04001 364 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 IFNA4P05014 189 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 OPN1MW2P0DN77 364 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 OPN1MW3P0DN78 364 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 MAS1LP35410 378 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 UBE2E1P51965 193 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 DLK1P80370 383 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 ERHP84090 104 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 ZNF616Q08AN1 781 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 PSG5Q15238 335 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 CENPVQ7Z7K6 275 aaPredicted RBP11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 RITA1Q96K30 269 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
POLR2J3-204ENST00000486319 KRBOX1C9JBD0 128 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 PRSS46E5RG02 174 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 VENTXO95231 258 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 TSPAN15O95858 294 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 CA2P00918 260 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 CRYGBP07316 175 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 FGF7P21781 194 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 GATA3P23771 443 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 LHFPL4Q7Z7J7 247 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 MRPL41Q8IXM3 137 aaKnown RBP11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 COMMD1Q8N668 190 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 FAM213BQ8TBF2 198 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 CFHR4Q92496 578 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 TBX15Q96SF7 602 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 RSG1Q9BU20 258 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 FBXO7Q9Y3I1 522 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
POLR2J3-204ENST00000486319 C17orf112F2Z3M2 114 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 MPDU1O75352 247 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 ACTL6BO94805 426 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 MDKP21741 143 aaPredicted RBP11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 ZP3P21754 424 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 SNCAP37840 140 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 FHITP49789 147 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 PRSS8Q16651 343 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 TMEM170AQ8WVE7 144 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 WDR83OSQ9Y284 106 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
POLR2J3-204ENST00000486319 A0A1W2PRD5 423 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 A0A1W2PRF3 423 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 A0A1W2PRM7 423 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 J3QLI3 93 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 SOX15O60248 233 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 MOSP00540 346 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 PPP1R27Q86WC6 154 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 LFNGQ8NES3 379 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 MALSU1Q96EH3 234 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
POLR2J3-204ENST00000486319 H2AFB1P0C5Y9 115 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 CNTFRP26992 372 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 SUB1P53999 127 aaKnown RBP eCLIP11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 RAB2AP61019 212 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 PAX8Q06710 450 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 SSX2Q16385 188 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 MRGPRG-AS1Q2M3A8 158 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 NPCDR1Q9BY65 106 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 NPVFQ9HCQ7 196 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
POLR2J3-204ENST00000486319 SMCO3A2RU48 225 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 BTBD17A6NE02 478 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 AVPP01185 164 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 IGKV1D-33P01593 117 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 IGKV1-33P01594 117 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 MBP02144 154 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 RPL27AP46776 148 aaKnown RBP11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 TNXAQ16473 311 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 NPBQ8NG41 125 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 KIAA1456Q9P272 454 aa11.65□□□□□ -0.54
POLR2J3-204ENST00000486319 CGB1A6NKQ9 187 aa11.65□□□□□ -0.55
POLR2J3-204ENST00000486319 E7EUB6 86 aa11.65□□□□□ -0.55
POLR2J3-204ENST00000486319 NBR2O15453 112 aa11.65□□□□□ -0.55
POLR2J3-204ENST00000486319 HBE1P02100 147 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms