RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	USMG5	Q96IX5	58 aa		11.99	□□□□□ -0.49
CCM2-215	ENST00000482714	TRBV9	A0A0B4J1U6	114 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	CEBPZOS	A8MTT3	80 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	FAM25E	A8MYX2	175 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	SYNGR2	O43760	224 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	SOX15	O60248	233 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	DEFA4	P12838	97 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	AREG	P15514	252 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	HTR2B	P41595	481 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	CDX1	P47902	265 aa	Predicted RBP	11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	RPP30	P78346	268 aa	Known RBP	11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	IL15RA	Q13261	267 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	FAM209B	Q5JX69	171 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	SHISA2	Q6UWI4	295 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	ASB13	Q8WXK3	278 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	UBE2E2	Q96LR5	201 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	CITED1	Q99966	193 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	NMES1	Q9C002	83 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	MED28	Q9H204	178 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	HEYL	Q9NQ87	328 aa	Predicted RBP	11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	GSKIP	Q9P0R6	139 aa		11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	F11R	Q9Y624	299 aa	Known RBP	11.98	□□□□□ -0.49
CCM2-215	ENST00000482714	TET2	Q6N021	2002 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	PF4V1	P10720	104 aa		11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	HOXA1	P49639	335 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	SRSF4	Q08170	494 aa	Known RBP	11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	PVRIG	Q6DKI7	326 aa		11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	NECAP1	Q8NC96	275 aa		11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	MYOZ3	Q8TDC0	251 aa		11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	DTD1	Q8TEA8	209 aa		11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	ZNF355P	Q9NSJ1	428 aa		11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.97	□□□□□ -0.49
CCM2-215	ENST00000482714	TCRBV4S1A1T	A0A5B7	111 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	FAM223B	A6NKX1	122 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	CORT	O00230	105 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	WRB	O00258	174 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	TRGV3	P03979	118 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	APELA	P0DMC3	54 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	TAS2R30	P59541	319 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	C2orf68	Q2NKX9	166 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	BSX	Q3C1V8	233 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714		Q6ZNX1	250 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	FAM223A	Q8IWN6	122 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	SPATA3	Q8NHX4	192 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	FANCD2OS	Q96PS1	177 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	RAB40C	Q96S21	281 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	RBKS	Q9H477	322 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	ANK2	Q01484	3957 aa		11.96	□□□□□ -0.49
CCM2-215	ENST00000482714	IGLV11-55	A0A075B6I3	123 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	CCS	O14618	274 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	GOSR2	O14653	212 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	RRAS2	P62070	204 aa	Predicted RBP	11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	KIAA0141	Q14154	515 aa	Predicted RBP	11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	C2orf83	Q53S99	150 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	TCTEX1D4	Q5JR98	221 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	SLC25A24	Q6NUK1	477 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	C10orf99	Q6UWK7	81 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	ZNF491	Q8N8L2	437 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	SMIM8	Q96KF7	97 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	ATP6V0B	Q99437	205 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	P2RX4	Q99571	388 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	KLK15	Q9H2R5	256 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	MGAT4C	Q9UBM8	478 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	CD28	P10747	220 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	KRTAP10-3	P60369	221 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	NDUFA11	Q86Y39	141 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	CXorf58	Q96LI9	332 aa		11.95	□□□□□ -0.5
CCM2-215	ENST00000482714	MBP	P02686	304 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	RLN2	P04090	185 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	RPLP1	P05386	114 aa	Known RBP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	REG1A	P05451	166 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	RNASE2	P10153	161 aa	Known RBP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	PVALB	P20472	110 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	H2BFS	P57053	126 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	TPPP2	P59282	170 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	POLR2G	P62487	172 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	ATP5G2	Q06055	141 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	SPINK9	Q5DT21	86 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	SLC24A4	Q8NFF2	622 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	VN1R17P	Q8TDU5	208 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	MS4A10	Q96PG2	267 aa		11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	CITED2	Q99967	270 aa	Predicted RBP	11.94	□□□□□ -0.5
CCM2-215	ENST00000482714	IFNA10	P01566	189 aa		11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	RAB11A	P62491	216 aa		11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	RPL23A	P62750	156 aa	Known RBP	11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	RHOG	P84095	191 aa		11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	RUNX1	Q01196	453 aa		11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	EXOSC2	Q13868	293 aa	Known RBP	11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	FBXL7	Q9UJT9	491 aa		11.93	□□□□□ -0.5
CCM2-215	ENST00000482714	TSC22D2	O75157	780 aa		11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	NXPH3	O95157	252 aa		11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	SIX6	O95475	246 aa		11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	NPY1R	P25929	384 aa		11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	FCN2	Q15485	313 aa		11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	MAGT1	Q9H0U3	335 aa		11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	GAR1	Q9NY12	217 aa	Known RBP	11.92	□□□□□ -0.5
CCM2-215	ENST00000482714	TRBV7-1	A0A0A6YYK4	115 aa		11.91	□□□□□ -0.5
CCM2-215	ENST00000482714		K7EPK0	472 aa		11.91	□□□□□ -0.5
CCM2-215	ENST00000482714	OR2J3	O76001	311 aa		11.91	□□□□□ -0.5

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