RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 RMI2Q96E14 147 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF414Q96IQ9 312 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 CKLFQ9UBR5 152 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 MBD5Q9P267 1494 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV7-4-1A0A0J9YVY3 117 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 LOC100130705A0A1B0GUX0 176 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 IRGMA1A4Y4 181 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 GGT3PA6NGU5 568 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 IFITM5A6NNB3 132 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 GGTLC3B5MD39 225 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 TAX1BP3O14907 124 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 CCL25O15444 150 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF728P0DKX0 622 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BOP23527 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 CASP1P29466 404 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BBP33778 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 NUDT2P50583 147 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 RAB5CP51148 216 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BDP58876 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 TIMM10P62072 90 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BCP62807 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 CCL20P78556 96 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 BSPH1Q075Z2 132 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 MSMO1Q15800 293 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST2H2BEQ16778 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.12□□□□□ -1.75
RC3H1-204ENST00000479099 LDLRAD2Q5SZI1 272 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 TIFABQ6ZNK6 161 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 OR5C1Q8NGR4 320 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 OR2T10Q8NGZ9 312 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 DCANP1Q8TF63 244 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BHQ93079 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 MGLLQ99685 303 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BNQ99877 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 HIST1H2BMQ99879 126 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 B9D2Q9BPU9 175 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF556Q9HAH1 456 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF580Q9UK33 172 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 KLK5Q9Y337 293 aaPredicted RBP4.12□□□□□ -1.75
RC3H1-204ENST00000479099 CSAG2Q9Y5P2 127 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 CARMIL3Q8ND23 1372 aa4.12□□□□□ -1.75
RC3H1-204ENST00000479099 COL5A2P05997 1499 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 ABCC10Q5T3U5 1492 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 PLXNB3Q9ULL4 1909 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 TRAV30A0A087WSZ9 112 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV5-10-1A0A0J9YXX1 117 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 MEIS3P1A6NDR6 274 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 A8MWL6 223 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 H0YJW9 148 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 M0R378 163 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF32P17041 273 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 SDC2P34741 201 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 GNG4P50150 75 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 CRISP3P54108 245 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 TMBIM6P55061 237 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 RNASE13Q5GAN3 156 aaKnown RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 RPL22L1Q6P5R6 122 aaKnown RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 SLC25A42Q86VD7 318 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 RNF175Q8N4F7 328 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 MMGT1Q8N4V1 131 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 FER1L6-AS1Q8NA97 138 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 RNASE6Q93091 150 aaKnown RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 LITAFQ99732 161 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 TSSK6Q9BXA6 273 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 TCEAL2Q9H3H9 227 aaPredicted RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 CBLN4Q9NTU7 201 aa4.11□□□□□ -1.75
RC3H1-204ENST00000479099 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.11□□□□□ -1.75
RC3H1-204ENST00000479099 FER1L6Q2WGJ9 1857 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV5-51A0A0C4DH38 117 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 TMEM218A2RU14 115 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 I3L521 148 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF688P0C7X2 276 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV1-8P0DP01 117 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 ELK1P19419 428 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 UBE2AP49459 152 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 TAS2R45P59539 299 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 SP6Q3SY56 376 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 BCL2L15Q5TBC7 163 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 SNX29P2Q8IUI4 249 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 IFT20Q8IY31 132 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF525Q8N782 197 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 KLHL30-AS1Q8NEE0 82 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 OR5A2Q8NGI9 324 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 OR4K13Q8NH42 304 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 PP6455Q8WZ26 134 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 MAGOHBQ96A72 148 aaKnown RBP4.1□□□□□ -1.75
RC3H1-204ENST00000479099 ZC2HC1AQ96GY0 325 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 C1orf147Q96MC9 270 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-204ENST00000479099 HDHD3Q9BSH5 251 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-204ENST00000479099 C1QTNF6Q9BXI9 259 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 TMEM133Q9H2Q1 129 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 RPP21Q9H633 154 aaKnown RBP4.1□□□□□ -1.75
RC3H1-204ENST00000479099 BOKQ9UMX3 212 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-204ENST00000479099 BAIAP2Q9UQB8 552 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 RNF11Q9Y3C5 154 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 TRAPPC8Q9Y2L5 1435 aa4.1□□□□□ -1.75
RC3H1-204ENST00000479099 SBF1O95248 1867 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms