RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TAS2R8Q9NYW2 309 aa5.43□□□□□ -1.54
BRCA1-214ENST00000477152 ETV7Q9Y603 341 aa5.43□□□□□ -1.54
BRCA1-214ENST00000477152 TENM2Q9NT68 2774 aa5.43□□□□□ -1.54
BRCA1-214ENST00000477152 IGLV11-55A0A075B6I3 123 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 SNAPC5O75971 98 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 CD5P06127 495 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 C8orf88P0DMB2 117 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 FGF9P31371 208 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 OR10A3P58181 314 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 GABARAPL2P60520 117 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 HERV-K104P61576 105 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TNFRSF9Q07011 255 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 C10orf55Q5SWW7 151 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 C22orf42Q6IC83 251 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 BTNL8Q6UX41 500 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 SSX9Q7RTT3 188 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 VKORC1L1Q8N0U8 176 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 BEST4Q8NFU0 473 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 SECTM1Q8WVN6 248 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 GALNT14Q96FL9 552 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 BSCL2Q96G97 398 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TMEM56Q96MV1 263 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 SLC5A7Q9GZV3 580 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 Q9H521 79 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TMEM213A2RRL7 107 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TSPAN4O14817 238 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TGOLN2O43493 480 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 IGHV3-23P01764 117 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 HLA-AP01891 365 aaKnown RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 EIF4EP06730 217 aaKnown RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TRAPPC2P0DI81 140 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TRAPPC2BP0DI82 140 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 FCGR2CP31995 323 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 GPR183P32249 361 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 PAFAH1B2P68402 229 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 RELQ04864 619 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TIMM50Q3ZCQ8 353 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 SLC25A24Q6NUK1 477 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 CEMP1Q6PRD7 247 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 CROCCP3Q8IVE0 287 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 CMTM1Q8IZ96 169 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 OR1L8Q8NGR8 309 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 OR13F1Q8NGS4 319 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 CNBD2Q96M20 576 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 OVOL2Q9BRP0 275 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 QTRT1Q9BXR0 403 aaKnown RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 MFFQ9GZY8 342 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 DAZ1Q9NQZ3 744 aaKnown RBP5.42□□□□□ -1.54
BRCA1-214ENST00000477152 COMMD9Q9P000 198 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 MLXQ9UH92 298 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 DAPK2Q9UIK4 370 aa5.42□□□□□ -1.54
BRCA1-214ENST00000477152 TMEM235A6NFC5 223 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 K7EMT4 169 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 NDUFA4O00483 81 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 UPK2O00526 184 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 RBMXL2O75526 392 aaKnown RBP5.41□□□□□ -1.54
BRCA1-214ENST00000477152 SCGB2A1O75556 95 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 PPYP01298 95 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 IFNA4P05014 189 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 AREGP15514 252 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 PCP4P48539 62 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 RPL30P62888 115 aaKnown RBP5.41□□□□□ -1.54
BRCA1-214ENST00000477152 POU2AF1Q16633 256 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 AADACL3Q5VUY0 350 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 ZNF502Q8TBZ5 544 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 C2CD4CQ8TF44 421 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 NUDCD2Q8WVJ2 157 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 RNF125Q96EQ8 232 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 TSC22D3Q99576 134 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 ZNF436Q9C0F3 470 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-214ENST00000477152 IFT46Q9NQC8 304 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 RHBDL2Q9NX52 303 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 RAB26Q9ULW5 256 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 RRP15Q9Y3B9 282 aaKnown RBP5.41□□□□□ -1.54
BRCA1-214ENST00000477152 DMRT1Q9Y5R6 373 aa5.41□□□□□ -1.54
BRCA1-214ENST00000477152 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 PSMB9P28065 219 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 TCTAP57738 103 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 OR2B8PP59922 312 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 PLA2G7Q13093 441 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 LPCAT3Q6P1A2 487 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 SFXN4Q6P4A7 337 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 LYG2Q86SG7 212 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 HOGA1Q86XE5 327 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 CADM3Q8N126 398 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 GDPD1Q8N9F7 314 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 GATAD1Q8WUU5 269 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 GIMAP1Q8WWP7 306 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 CACNG8Q8WXS5 425 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 TMEM190Q8WZ59 177 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 LSM10Q969L4 123 aaKnown RBP5.4□□□□□ -1.54
BRCA1-214ENST00000477152 YTHDF1Q9BYJ9 559 aaKnown RBP5.4□□□□□ -1.54
BRCA1-214ENST00000477152 WFDC10AQ9H1F0 79 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 CCL28Q9NRJ3 127 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 TXNL4BQ9NX01 149 aaKnown RBP5.4□□□□□ -1.54
BRCA1-214ENST00000477152 C21orf62Q9NYP8 219 aa5.4□□□□□ -1.54
BRCA1-214ENST00000477152 HUWE1Q7Z6Z7 4374 aaKnown RBP5.4□□□□□ -1.55
BRCA1-214ENST00000477152 TRAV18A0A075B6X5 111 aa5.4□□□□□ -1.55
BRCA1-214ENST00000477152 IGKV1D-13A0A0B4J2D9 117 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 425.4 ms