RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 RTL8AQ9BWD3 113 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 SLC35B3Q9H1N7 401 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 LIN7CQ9NUP9 197 aaKnown RBP3.99□□□□□ -1.77
NPHP3-206ENST00000474871 MYO7AQ13402 2215 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 C5orf42Q9H799 3197 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 MYOFQ9NZM1 2061 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 LRRK1Q38SD2 2015 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 PRSS46E5RG02 174 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 H3BRM9 83 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 GABARAPH6UMI1 98 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 K7EQS6 105 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 LDB3O75112 727 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 SOX14O95416 240 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 SRP19P09132 144 aaKnown RBP3.99□□□□□ -1.77
NPHP3-206ENST00000474871 COX6B1P14854 86 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 IGLL1P15814 213 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 SUB1P53999 127 aaKnown RBP eCLIP3.99□□□□□ -1.77
NPHP3-206ENST00000474871 LCN6P62502 163 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 HES1Q14469 280 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 HES3Q5TGS1 186 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 OR10P1Q8NGE3 313 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 H1FXQ92522 213 aaKnown RBP3.99□□□□□ -1.77
NPHP3-206ENST00000474871 FAM19A4Q96LR4 140 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 RARRES2Q99969 163 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 SFXN3Q9BWM7 321 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 SLC25A39Q9BZJ4 359 aaPredicted RBP3.99□□□□□ -1.77
NPHP3-206ENST00000474871 VSIG4Q9Y279 399 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 KCNE3Q9Y6H6 103 aa3.99□□□□□ -1.77
NPHP3-206ENST00000474871 DNAJC13O75165 2243 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 TMED7-TICAM2A0A0A6YYA0 188 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 TRGV5A0A0B4J1U4 118 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 A0A1W2PP11 408 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 FAM166BA8MTA8 275 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 H3BS24 57 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 RER1O15258 196 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 KLK2P20151 261 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 MTCP1P56278 107 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 RBM11P57052 281 aaKnown RBP3.98□□□□□ -1.77
NPHP3-206ENST00000474871 ARL16Q0P5N6 197 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 INSL4Q14641 139 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 PLK5Q496M5 336 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 ZNF880Q6PDB4 577 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 C10orf111Q8N326 155 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 STPG3Q8N7X2 389 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 OR10G8Q8NGN5 311 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 SRSF12Q8WXF0 261 aaKnown RBP3.98□□□□□ -1.77
NPHP3-206ENST00000474871 RDH5Q92781 318 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 TMED7Q9Y3B3 224 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 TCF20Q9UGU0 1960 aaKnown RBP3.98□□□□□ -1.77
NPHP3-206ENST00000474871 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 A0A1W2PRD5 423 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 PRR32B1ATL7 298 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 F2Z2F3 143 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 C16orf97H3BN30 126 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 TTRP02766 147 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 CA7P43166 264 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 WFDC2Q14508 124 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 SP6Q3SY56 376 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 PAGE3Q5JUK9 113 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 C9orf139Q6ZV77 190 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 SGPP2Q8IWX5 399 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 OTOSQ8NHW6 89 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 C18orf32Q8TCD1 76 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 ZNF286AQ9HBT8 521 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 Q9UF83 564 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 C7orf71A4D174 169 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 OOSP1A8MZH6 123 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 AMY1AP04745 511 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 GABRG2P18507 467 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 UBE2E1P51965 193 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 ROM1Q03395 351 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 FUT5Q11128 374 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 IL13RA2Q14627 380 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 CEACAM19Q7Z692 300 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 RPS4Y2Q8TD47 263 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 TMEM171Q8WVE6 324 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 SMIM4Q8WVI0 70 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 UBE2E2Q96LR5 201 aa3.98□□□□□ -1.77
NPHP3-206ENST00000474871 A0A096LPE4 126 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 A0A1W2PPZ6 126 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 BCL3P20749 454 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 OPRM1P35372 400 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 DRD3P35462 400 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 CFHR1Q03591 330 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 RTP5Q14D33 572 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 RNPS1Q15287 305 aaKnown RBP3.97□□□□□ -1.77
NPHP3-206ENST00000474871 RASL11AQ6T310 242 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 TEPPQ6URK8 271 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 OR51E1Q8TCB6 317 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 ATP5SQ99766 215 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 RPP25Q9BUL9 199 aaKnown RBP3.97□□□□□ -1.77
NPHP3-206ENST00000474871 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 PRDM14Q9GZV8 571 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 CISD1Q9NZ45 108 aaKnown RBP3.97□□□□□ -1.77
NPHP3-206ENST00000474871 RNF7Q9UBF6 113 aa3.97□□□□□ -1.77
NPHP3-206ENST00000474871 KLK5Q9Y337 293 aaPredicted RBP3.97□□□□□ -1.77
NPHP3-206ENST00000474871 RANBP2P49792 3224 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms