RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PRSS57Q6UWY2 283 aa15.15■□□□□ 0.02
SMC4-209ENST00000468653 HRH4Q9H3N8 390 aa15.15■□□□□ 0.02
SMC4-209ENST00000468653 PARP11Q9NR21 331 aa15.15■□□□□ 0.02
SMC4-209ENST00000468653 ZNF616Q08AN1 781 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 C5orf64Q2M2E5 130 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 FAM120AOSQ5T036 256 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 BTNL8Q6UX41 500 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 BRD3OSQ6XYD6 125 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 Q8N6K4 173 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 ZNF709Q8N972 641 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 FAM213BQ8TBF2 198 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 Q96MF0 132 aa15.14■□□□□ 0.01
SMC4-209ENST00000468653 IGHV4-38-2P0DP08 117 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 FHITP49789 147 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 WDR83OSQ9Y284 106 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 TIMM9Q9Y5J7 89 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 IGLC7A0M8Q6 106 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 MFSD2BA6NFX1 497 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 TGFAP01135 160 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 SERF2P84101 59 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 SRSF12Q8WXF0 261 aaKnown RBP15.13■□□□□ 0.01
SMC4-209ENST00000468653 C1RLQ9NZP8 487 aa15.13■□□□□ 0.01
SMC4-209ENST00000468653 PLXNB1O43157 2135 aa15.12■□□□□ 0.01
SMC4-209ENST00000468653 REG1AP05451 166 aa15.12■□□□□ 0.01
SMC4-209ENST00000468653 MDKP21741 143 aaPredicted RBP15.12■□□□□ 0.01
SMC4-209ENST00000468653 MARC2Q969Z3 335 aa15.12■□□□□ 0.01
SMC4-209ENST00000468653 P2RX4Q99571 388 aa15.12■□□□□ 0.01
SMC4-209ENST00000468653 NPVFQ9HCQ7 196 aa15.12■□□□□ 0.01
SMC4-209ENST00000468653 C17orf112F2Z3M2 114 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 MPDU1O75352 247 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 APELAP0DMC3 54 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 AANATQ16613 207 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 ARSJQ5FYB0 599 aaPredicted RBP15.11■□□□□ 0.01
SMC4-209ENST00000468653 TREML4Q6UXN2 200 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 HSD17B13Q7Z5P4 300 aaPredicted RBP15.11■□□□□ 0.01
SMC4-209ENST00000468653 NPCDR1Q9BY65 106 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 FAM96BQ9Y3D0 163 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 A0A0U1RQK1 487 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 TEX22C9J3V5 150 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 J3QLI3 93 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 AREGP15514 252 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 ELLP55199 621 aaPredicted RBP15.11■□□□□ 0.01
SMC4-209ENST00000468653 SSBP2P81877 361 aaPredicted RBP15.11■□□□□ 0.01
SMC4-209ENST00000468653 AKR1C1Q04828 323 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 FXYD3Q14802 87 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 DPPA3Q6W0C5 159 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 CENPVQ7Z7K6 275 aaPredicted RBP15.11■□□□□ 0.01
SMC4-209ENST00000468653 ABHD5Q8WTS1 349 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 SSMEM1Q8WWF3 244 aa15.11■□□□□ 0.01
SMC4-209ENST00000468653 NUDT19A8MXV4 375 aa15.1■□□□□ 0.01
SMC4-209ENST00000468653 FNDC10F2Z333 226 aa15.1■□□□□ 0.01
SMC4-209ENST00000468653 AVPP01185 164 aa15.1■□□□□ 0.01
SMC4-209ENST00000468653 IGHV4-31P0DP07 118 aa15.1■□□□□ 0.01
SMC4-209ENST00000468653 TMEM249Q2WGJ8 235 aa15.1■□□□□ 0.01
SMC4-209ENST00000468653 KRTAP1-3Q8IUG1 177 aa15.1■□□□□ 0.01
SMC4-209ENST00000468653 RNASEH2CQ8TDP1 164 aaKnown RBP15.1■□□□□ 0.01
SMC4-209ENST00000468653 SRSF8Q9BRL6 282 aaKnown RBP15.1■□□□□ 0.01
SMC4-209ENST00000468653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.09■□□□□ 0.013e-9■■■■■ 52.5
SMC4-209ENST00000468653 APCP25054 2843 aa15.09■□□□□ 0.01
SMC4-209ENST00000468653 MAP1AP78559 2803 aaPredicted RBP15.09■□□□□ 0.01
SMC4-209ENST00000468653 TSPAN15O95858 294 aa15.09■□□□□ 0.01
SMC4-209ENST00000468653 IL34Q6ZMJ4 242 aa15.09■□□□□ 0.01
SMC4-209ENST00000468653 MEGF9Q9H1U4 602 aa15.09■□□□□ 0.01
SMC4-209ENST00000468653 ANKRD34BA5PLL1 514 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 I3L521 148 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 CD69Q07108 199 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 TMEM41BQ5BJD5 291 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 KLF17Q5JT82 389 aaPredicted RBP15.08■□□□□ 0.01
SMC4-209ENST00000468653 TEPPQ6URK8 271 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 ZNF562Q6V9R5 426 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 EIF4E3Q8N5X7 224 aaKnown RBP15.08■□□□□ 0.01
SMC4-209ENST00000468653 ZNF114Q8NC26 417 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 CACNG8Q8WXS5 425 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 VSIRQ9H7M9 311 aa15.08■□□□□ 0.01
SMC4-209ENST00000468653 RAB19A4D1S5 217 aa15.08■□□□□ 0
SMC4-209ENST00000468653 H2AFB1P0C5Y9 115 aa15.08■□□□□ 0
SMC4-209ENST00000468653 GPX4P36969 197 aaPredicted RBP15.08■□□□□ 0
SMC4-209ENST00000468653 CX3CL1P78423 397 aa15.08■□□□□ 0
SMC4-209ENST00000468653 MLANAQ16655 118 aa15.08■□□□□ 0
SMC4-209ENST00000468653 FFAR4Q5NUL3 377 aa15.08■□□□□ 0
SMC4-209ENST00000468653 Q8N9W7 124 aa15.08■□□□□ 0
SMC4-209ENST00000468653 LYPD6BQ8NI32 183 aa15.08■□□□□ 0
SMC4-209ENST00000468653 RASL11BQ9BPW5 248 aa15.08■□□□□ 0
SMC4-209ENST00000468653 RPRMQ9NS64 109 aa15.08■□□□□ 0
SMC4-209ENST00000468653 AGPAT2O15120 278 aa15.07■□□□□ 0
SMC4-209ENST00000468653 OPRK1P41145 380 aa15.07■□□□□ 0
SMC4-209ENST00000468653 RAB31Q13636 194 aa15.07■□□□□ 0
SMC4-209ENST00000468653 SLC16A13Q7RTY0 426 aa15.07■□□□□ 0
SMC4-209ENST00000468653 OR1P1Q8NH06 330 aa15.07■□□□□ 0
SMC4-209ENST00000468653 MISP3Q96FF7 219 aa15.07■□□□□ 0
SMC4-209ENST00000468653 SLC35E1Q96K37 410 aa15.07■□□□□ 0
SMC4-209ENST00000468653 MGST2Q99735 147 aa15.07■□□□□ 0
SMC4-209ENST00000468653 MBP02144 154 aa15.06■□□□□ 0
SMC4-209ENST00000468653 FBP1P09467 338 aa15.06■□□□□ 0
SMC4-209ENST00000468653 GAMTQ14353 236 aa15.06■□□□□ 0
SMC4-209ENST00000468653 ACSM6Q6P461 480 aa15.06■□□□□ 0
SMC4-209ENST00000468653 TMEM144Q7Z5S9 345 aa15.06■□□□□ 0
SMC4-209ENST00000468653 ARPC1AQ92747 370 aa15.06■□□□□ 0
SMC4-209ENST00000468653 FAM103A1Q9BTL3 118 aaKnown RBP15.06■□□□□ 0
SMC4-209ENST00000468653 LSM4Q9Y4Z0 139 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms