RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 RBKSQ9H477 322 aa11.89□□□□□ -0.51
SNIP1-202ENST00000468040 HEYLQ9NQ87 328 aaPredicted RBP11.89□□□□□ -0.51
SNIP1-202ENST00000468040 SYNGR2O43760 224 aa11.88□□□□□ -0.51
SNIP1-202ENST00000468040 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
SNIP1-202ENST00000468040 SUB1P53999 127 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNIP1-202ENST00000468040 RRAS2P62070 204 aaPredicted RBP11.88□□□□□ -0.51
SNIP1-202ENST00000468040 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
SNIP1-202ENST00000468040 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
SNIP1-202ENST00000468040 NMES1Q9C002 83 aa11.88□□□□□ -0.51
SNIP1-202ENST00000468040 ZFP57Q9NU63 452 aa11.88□□□□□ -0.51
SNIP1-202ENST00000468040 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
SNIP1-202ENST00000468040 SIX6O95475 246 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 SCGB1D2O95969 90 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 TRGV3P03979 118 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 CD28P10747 220 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 HTR2BP41595 481 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 RAB9AP51151 201 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 H2BFSP57053 126 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 TPPP2P59282 170 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 MDFIQ99750 246 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 ZNF747Q9BV97 191 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 MAGT1Q9H0U3 335 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 THYN1Q9P016 225 aa11.87□□□□□ -0.51
SNIP1-202ENST00000468040 TRBV9A0A0B4J1U6 114 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 TCRBV4S1A1TA0A5B7 111 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 FAM223BA6NKX1 122 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
SNIP1-202ENST00000468040 POLR2GP62487 172 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNIP1-202ENST00000468040 CD83Q01151 205 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 FCN2Q15485 313 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 KLK9Q2XQG4 91 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 BSXQ3C1V8 233 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 TCTEX1D4Q5JR98 221 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 Q6ZNX1 250 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 FAM223AQ8IWN6 122 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 NECAP1Q8NC96 275 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 SLC24A4Q8NFF2 622 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 RAB40CQ96S21 281 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 P2RX4Q99571 388 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 CITED1Q99966 193 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 KLK9Q9UKQ9 250 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 U3KQ87 197 aa11.86□□□□□ -0.51
SNIP1-202ENST00000468040 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
SNIP1-202ENST00000468040 IGLV11-55A0A075B6I3 123 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 CORTO00230 105 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 SSSCA1O60232 199 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 MBPP02686 304 aaPredicted RBP11.85□□□□□ -0.51
SNIP1-202ENST00000468040 PRH1P02810 166 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
SNIP1-202ENST00000468040 CXCL3P19876 107 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 KRTAP10-3P60369 221 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 RPP30P78346 268 aaKnown RBP11.85□□□□□ -0.51
SNIP1-202ENST00000468040 RHOGP84095 191 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 IL15RAQ13261 267 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 KHDC1LQ5JSQ8 128 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 SHISA2Q6UWI4 295 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 OR11H7Q8NGC8 314 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 USMG5Q96IX5 58 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
SNIP1-202ENST00000468040 CITED2Q99967 270 aaPredicted RBP11.85□□□□□ -0.51
SNIP1-202ENST00000468040 TSSC4Q9Y5U2 329 aaPredicted RBP11.85□□□□□ -0.51
SNIP1-202ENST00000468040 K7EPK0 472 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 OR2J3O76001 311 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 IFNA10P01566 189 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 RNASE2P10153 161 aaKnown RBP11.84□□□□□ -0.51
SNIP1-202ENST00000468040 IAPPP10997 89 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 NPY1RP25929 384 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 S100A10P60903 97 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 RPL23AP62750 156 aaKnown RBP11.84□□□□□ -0.51
SNIP1-202ENST00000468040 SRSF4Q08170 494 aaKnown RBP11.84□□□□□ -0.51
SNIP1-202ENST00000468040 C2orf83Q53S99 150 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 SLC25A24Q6NUK1 477 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 UBE2E2Q96LR5 201 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 FBXL7Q9UJT9 491 aa11.84□□□□□ -0.51
SNIP1-202ENST00000468040 L7N2F9 121 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 PVALBP20472 110 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-202ENST00000468040 CDX1P47902 265 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-202ENST00000468040 MFAP2P55001 183 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 TAS2R30P59541 319 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 VAMP2P63027 116 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 RAB32Q13637 225 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 KIAA0141Q14154 515 aaPredicted RBP11.83□□□□□ -0.52
SNIP1-202ENST00000468040 C15orf32Q32M92 178 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 PVRIGQ6DKI7 326 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 ZNF491Q8N8L2 437 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 SMIM8Q96KF7 97 aa11.83□□□□□ -0.52
SNIP1-202ENST00000468040 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms