RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 APELAP0DMC3 54 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
UBE4B-206ENST00000466379 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 AKAP6Q13023 2319 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 RNF224P0DH78 156 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 TM4SF20Q53R12 229 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 LHFPL4Q7Z7J7 247 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 VAX2Q9UIW0 290 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
UBE4B-206ENST00000466379 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
UBE4B-206ENST00000466379 IFNA1P01562 189 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 LGALS7P47929 136 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 B2MP61769 119 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 ERHP84090 104 aaKnown RBP10.89□□□□□ -0.67
UBE4B-206ENST00000466379 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 HCP5Q6MZN7 132 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 STPG3Q8N7X2 389 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 NAV3Q8IVL0 2385 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 IGKV1OR2-108A0A075B7D4 117 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 A0A1W2PPI3 338 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 IGHV3-48P01763 117 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 EFNA4P52798 201 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 GNB1P62873 340 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 GAMTQ14353 236 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 PSG5Q15238 335 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 TNXAQ16473 311 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 ANAPC16Q96DE5 110 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 CACNA1BQ00975 2339 aa10.89□□□□□ -0.67
UBE4B-206ENST00000466379 A0A1W2PN81 502 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 A0A1W2PPV4 95 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 SEC14L6B5MCN3 397 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 TIMM23O14925 209 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 GATA2P23769 480 aaPredicted RBP10.88□□□□□ -0.67
UBE4B-206ENST00000466379 CD24P25063 80 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 CHRNA7P36544 502 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 CD81P60033 236 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 LCN2P80188 198 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 TPTE2P1Q5T6R2 138 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 OR2T6Q8NHC8 308 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 FBXL15Q9H469 300 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 UNKLQ9H9P5 680 aaKnown RBP10.88□□□□□ -0.67
UBE4B-206ENST00000466379 METTL1Q9UBP6 276 aaKnown RBP10.88□□□□□ -0.67
UBE4B-206ENST00000466379 ASH1LQ9NR48 2969 aaKnown RBP10.88□□□□□ -0.67
UBE4B-206ENST00000466379 PAGE4O60829 102 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 CRYGBP07316 175 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 HTR1DP28221 377 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 PRSS8Q16651 343 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 ANKRD39Q53RE8 183 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 RBMS3Q6XE24 437 aaKnown RBP10.88□□□□□ -0.67
UBE4B-206ENST00000466379 P2RX4Q99571 388 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 SMCO4Q9NRQ5 59 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 SIGLEC9Q9Y336 463 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 USP24Q9UPU5 2620 aa10.88□□□□□ -0.67
UBE4B-206ENST00000466379 COL12A1Q99715 3063 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 M0R1W7 72 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 PSMB3P49720 205 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 MEF2BQ02080 365 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-206ENST00000466379 CD69Q07108 199 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 VMO1Q7Z5L0 202 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 SLC35E3Q7Z769 313 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 TEX45Q8NA69 505 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 OR11H6Q8NGC7 330 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 ABHD5Q8WTS1 349 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 ACY3Q96HD9 319 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 BPESC1Q9GZL8 116 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 IGHV2-5P01817 119 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 LINC00869P0C866 280 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 AREGP15514 252 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 PRTN3P24158 256 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 OR10J1P30954 320 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 UBE2G2P60604 165 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 SSBP2P81877 361 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-206ENST00000466379 RHEBQ15382 184 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 FBLN7Q53RD9 439 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 SLC16A13Q7RTY0 426 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 TMEM144Q7Z5S9 345 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 NIPSNAP3BQ9BS92 247 aa10.87□□□□□ -0.67
UBE4B-206ENST00000466379 SEPSECSQ9HD40 501 aaKnown RBP10.87□□□□□ -0.67
UBE4B-206ENST00000466379 COLCA2A8K830 154 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 ZNF727A8MUV8 499 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 INS-IGF2F8WCM5 200 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 FCN1O00602 326 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 ACTL6BO94805 426 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 ARL14EPLP0DKL9 152 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
UBE4B-206ENST00000466379 RPL29P47914 159 aaKnown RBP10.86□□□□□ -0.67
UBE4B-206ENST00000466379 LGALS4P56470 323 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 RAB31Q13636 194 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 SVEP1Q4LDE5 3571 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 MMD2Q8IY49 270 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 OR4F5Q8NH21 305 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
UBE4B-206ENST00000466379 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-206ENST00000466379 DPM3Q9P2X0 92 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms