RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 OR5R1Q8NH85 324 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 RITA1Q96K30 269 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TMEM68Q96MH6 324 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 RBM14Q96PK6 669 aaKnown RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 GGACTQ9BVM4 153 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 LYRM2Q9NU23 88 aaPredicted RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 PSENENQ9NZ42 101 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 OR5AC2Q9NZP5 309 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 KIAA1456Q9P272 454 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 MBD2Q9UBB5 411 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TCF19Q9Y242 345 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 RCL1Q9Y2P8 373 aaKnown RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 LSM5Q9Y4Y9 91 aaKnown RBP4.35□□□□□ -1.71
VPS41-211ENST00000466017 OR51B2Q9Y5P1 312 aa4.35□□□□□ -1.71
VPS41-211ENST00000466017 TNCP24821 2201 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 ABCA1O95477 2261 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 FBN2P35556 2912 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 FXYD6-FXYD2A0A087WZ82 144 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 IGHV3-72A0A0B4J1Y9 119 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 A0A1W2PRD5 423 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 A0A1W2PRF3 423 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 A0A1W2PRM7 423 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 RNF222A6NCQ9 220 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 A6NDX4 124 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 PMS2P5A8MQ11 134 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 FNDC10F2Z333 226 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 L7N2F9 121 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 ARPC5O15511 151 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 RBMXL2O75526 392 aaKnown RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 BRI3O95415 125 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 TMEM50AO95807 157 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 IFNA17P01571 189 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 IGKV1D-33P01593 117 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 IGKV1-33P01594 117 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 HLA-DRB1P01911 266 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 CRYGCP07315 174 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 RPL12P30050 165 aaKnown RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 HTR2BP41595 481 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 CRIP2P52943 208 aaPredicted RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 AP2S1P53680 142 aaPredicted RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 F2RL1P55085 397 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 OR2B8PP59922 312 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 VAMP2P63027 116 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 EIF5AP63241 154 aaKnown RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 ERHP84090 104 aaKnown RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 KRTAP1-1Q07627 177 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 OPCMLQ14982 345 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 IZUMO4Q1ZYL8 232 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 LRRC75BQ2VPJ9 315 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 LRRC37A5PQ49AS3 106 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 C2orf83Q53S99 150 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 TMUB2Q71RG4 321 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 SSX9Q7RTT3 188 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 SLC51BQ86UW2 128 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 VKORC1L1Q8N0U8 176 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 CIARTQ8N365 385 aaPredicted RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 TMEM86BQ8N661 226 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 Q8N9W7 124 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 OR1L6Q8NGR2 347 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 DTD1Q8TEA8 209 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 C17orf50Q8WW18 174 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 DCUN1D4Q92564 292 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 SSX3Q99909 188 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 PARD6GQ9BYG4 376 aaPredicted RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 COMMD5Q9GZQ3 224 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 ARV1Q9H2C2 271 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 HIPK2Q9H2X6 1198 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 RBKSQ9H477 322 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 ZNF430Q9H8G1 570 aaPredicted RBP4.34□□□□□ -1.71
VPS41-211ENST00000466017 ZNF580Q9UK33 172 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 FAM96BQ9Y3D0 163 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 HSPB11Q9Y547 144 aa4.34□□□□□ -1.71
VPS41-211ENST00000466017 ABCA2Q9BZC7 2435 aa4.34□□□□□ -1.72
VPS41-211ENST00000466017 LRBAP50851 2863 aa4.34□□□□□ -1.72
VPS41-211ENST00000466017 DCHS2Q6V1P9 2916 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 FASNP49327 2511 aaKnown RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 NAV2Q8IVL1 2488 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 A0A0U1RQK1 487 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 KANTRA0A1W2PQU2 76 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 FAM24AA6NFZ4 105 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 MSGN1A6NI15 193 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 CEBPZOSA8MTT3 80 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 SLC25A17O43808 307 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 SOX15O60248 233 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 DFFBO76075 338 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 JTBO76095 146 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 ACTL6BO94805 426 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 SCGB1D2O95969 90 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 OR8U8P0C7N1 319 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 TMEM11P17152 192 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 IER3P46695 156 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 RPL27AP46776 148 aaKnown RBP4.33□□□□□ -1.72
VPS41-211ENST00000466017 SULT1A1P50225 295 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 SUB1P53999 127 aaKnown RBP eCLIP4.33□□□□□ -1.72
VPS41-211ENST00000466017 S100A10P60903 97 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 RAB11AP62491 216 aa4.33□□□□□ -1.72
VPS41-211ENST00000466017 HBG1P69891 147 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms