RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 WNT10AQ9GZT5 417 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 SAP30LQ9HAJ7 183 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 C1RLQ9NZP8 487 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 USF3Q68DE3 2245 aa5.99□□□□□ -1.45
USP48-206ENST00000464577 IGHV2-70DA0A0C4DH43 119 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 ACTL6BO94805 426 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 TFF1P04155 84 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 NTF3P20783 257 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 TNFSF4P23510 183 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 HINT1P49773 126 aaPredicted RBP5.98□□□□□ -1.45
USP48-206ENST00000464577 LOXL3P58215 753 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 RPS20P60866 119 aaKnown RBP5.98□□□□□ -1.45
USP48-206ENST00000464577 UBE2G1P62253 170 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 SLAQ13239 276 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 COTL1Q14019 142 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 RPL39P5Q59GN2 51 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 FAM162BQ5T6X4 162 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 SPACA3Q8IXA5 215 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 FAM19A2Q8N3H0 131 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 OR4F17Q8NGA8 305 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 PPP1R35Q8TAP8 253 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 GRAMD2BQ96HH9 432 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 OR2V2Q96R30 315 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 DCTN5Q9BTE1 182 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 CHRDL1Q9BU40 450 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 PLEKHA3Q9HB20 300 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 IDI2-AS1Q9NZ38 188 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 KLF13Q9Y2Y9 288 aaPredicted RBP5.98□□□□□ -1.45
USP48-206ENST00000464577 TRAV34A0A0B4J273 112 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 MGST3O14880 152 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 HSBP1O75506 76 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 CFIP05156 583 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 C8orf88P0DMB2 117 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 IGHV1-2P23083 117 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 PRDX2P32119 198 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 MEOX1P50221 254 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 SLC35B1P78383 322 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 MZT1Q08AG7 82 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 EDDM3AQ14507 147 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 LTC4SQ16873 150 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 FBLN7Q53RD9 439 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 PEAR1Q5VY43 1037 aaPredicted RBP5.98□□□□□ -1.45
USP48-206ENST00000464577 OR4A47Q6IF82 309 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 UNQ5815/PRO19632Q6UWF5 114 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 ATP5L2Q7Z4Y8 100 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 ADTRPQ96IZ2 230 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 NCOR1P1Q9H4R4 102 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 RAB9BQ9NP90 201 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 PRNDQ9UKY0 176 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 ZNF257Q9Y2Q1 563 aa5.98□□□□□ -1.45
USP48-206ENST00000464577 LOC105371242A0A075B767 164 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 TRAV30A0A087WSZ9 112 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 A0A1W2PN81 502 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 C2orf70A6NJV1 201 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 AHRRA9YTQ3 701 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 M0R2Z0 102 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 TIMM8AO60220 97 aaPredicted RBP5.97□□□□□ -1.45
USP48-206ENST00000464577 OR7C2O60412 319 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 CER1O95813 267 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 MGST1P10620 155 aaKnown RBP5.97□□□□□ -1.45
USP48-206ENST00000464577 ARG2P78540 354 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 PRCDQ00LT1 54 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 TNXAQ16473 311 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 LCN12Q6JVE5 192 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 EBLN2Q6P2I7 272 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 MDS2Q8NDY4 140 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 LRRC29Q8WV35 223 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 ALKBH7Q9BT30 221 aaPredicted RBP5.97□□□□□ -1.45
USP48-206ENST00000464577 SPRY4Q9C004 299 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 FAM234AQ9H0X4 552 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 GSX1Q9H4S2 264 aaPredicted RBP5.97□□□□□ -1.45
USP48-206ENST00000464577 SERTAD4Q9NUC0 356 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 OR51B2Q9Y5P1 312 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 CNTRLQ7Z7A1 2325 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 COL27A1Q8IZC6 1860 aaPredicted RBP5.97□□□□□ -1.45
USP48-206ENST00000464577 SZT2Q5T011 3432 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 C21orf140B9A014 251 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 KLRC4-KLRK1H3BQV0 150 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 IGLL1P15814 213 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 IGFBP4P22692 258 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 ZNF134P52741 427 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 HOXA4Q00056 320 aaPredicted RBP5.97□□□□□ -1.45
USP48-206ENST00000464577 MAJINQ3KP22 176 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 C2orf83Q53S99 150 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 LRRC10Q5BKY1 277 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 VWA1Q6PCB0 445 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 ATOH7Q8N100 152 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 LYG1Q8N1E2 194 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 GCSAMQ8N6F7 178 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 ZNF714Q96N38 554 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 TRIB1Q96RU8 372 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 SLC25A33Q9BSK2 321 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 ST20Q9HBF5 79 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 GCM1Q9NP62 436 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 TNFRSF19Q9NS68 423 aa5.97□□□□□ -1.45
USP48-206ENST00000464577 TET2Q6N021 2002 aaPredicted RBP5.96□□□□□ -1.46
USP48-206ENST00000464577 PI4KAP42356 2102 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 IGKV1D-17A0A075B6S4 117 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 PSMB11A5LHX3 300 aa5.96□□□□□ -1.46
USP48-206ENST00000464577 SRRM5B3KS81 715 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms