RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 UCP3P55916 312 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 TSPAN5P62079 268 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 LAMTOR1Q6IAA8 161 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 OR1P1Q8NH06 330 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 COMMD3Q9UBI1 195 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 NSG2Q9Y328 171 aa10.72□□□□□ -0.69
SNRNP40-203ENST00000463988 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 F8W735 103 aaPredicted RBP10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 K7EIM0 57 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 JTBO76095 146 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 RCVRNP35243 200 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 PHLDA2Q53GA4 152 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 SEC22AQ96IW7 307 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 OVOL2Q9BRP0 275 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 CHRDL1Q9BU40 450 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 FUNDC2Q9BWH2 189 aa10.71□□□□□ -0.69
SNRNP40-203ENST00000463988 DBX1A6NMT0 343 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 FCGR2BP31994 310 aaPredicted RBP10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 ADMP35318 185 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 NCS1P62166 190 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 TBC1D26Q86UD7 250 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 SNX29P2Q8IUI4 249 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 TXN2Q99757 166 aa10.7□□□□□ -0.7
SNRNP40-203ENST00000463988 PLECQ15149 4684 aaKnown RBP10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 CTSGP08311 255 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 ELK1P19419 428 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 APOC4P55056 127 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 Q56UQ5 140 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 Q6ZWC4 215 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 H2BFWTQ7Z2G1 175 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 WFDC3Q8IUB2 231 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 ZNF114Q8NC26 417 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 OR4A16Q8NH70 328 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
SNRNP40-203ENST00000463988 IGHV3-21A0A0B4J1V1 117 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 KIR2DL5BA0A0G2JN68 375 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 KIR2DL5BA0A0G2JPC4 375 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 OR4C46A6NHA9 309 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 UBE2CO00762 179 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 IGKV1-39P01597 117 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 IGKV1D-39P04432 117 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 RORCP51449 518 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 RND3P61587 244 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 HSPE1P61604 102 aaKnown RBP10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 VBP1P61758 197 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 PRCDQ00LT1 54 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 RELQ04864 619 aaPredicted RBP10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 MZT2AQ6P582 158 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 KIR2DL5AQ8N109 375 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 UBAC2Q8NBM4 344 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 KIR2DL5BQ8NHK3 375 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 ZNF486Q96H40 463 aaPredicted RBP10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 C20orf24Q9BUV8 137 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
SNRNP40-203ENST00000463988 EPPK1P58107 5090 aaKnown RBP10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 I3L2K1 104 aa10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 NUPL2O15504 423 aaKnown RBP10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 HPGDSO60760 199 aa10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 MFAP4P55083 255 aa10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 ODF3L2Q3SX64 289 aa10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 OR10C1Q96KK4 312 aa10.67□□□□□ -0.7
SNRNP40-203ENST00000463988 TBPP20226 339 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 BMI1P35226 326 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 ERHP84090 104 aaKnown RBP10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 LHFPL1Q86WI0 220 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 ARRDC1Q8N5I2 433 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 AP3S1Q92572 193 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 MRGPRFQ96AM1 343 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 MISP3Q96FF7 219 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 ZNF414Q96IQ9 312 aa10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 NXF2Q9GZY0 626 aaKnown RBP10.66□□□□□ -0.7
SNRNP40-203ENST00000463988 IGHV7-4-1A0A0J9YVY3 117 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 INS-IGF2F8WCM5 200 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 M0QYG6 137 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 SPRY2O43597 315 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 ZNF207O43670 478 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 ATG12O94817 140 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 MT-CO2P00403 227 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 CTSDP07339 412 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 ATF4P18848 351 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 TNFRSF9Q07011 255 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 RNASE10Q5GAN6 216 aaKnown RBP10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 C15orf40Q8WUR7 153 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 GALNT14Q96FL9 552 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 UBQLN2Q9UHD9 624 aa10.65□□□□□ -0.7
SNRNP40-203ENST00000463988 IGHV3OR16-8A0A075B7F1 116 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 FAM25AB3EWG3 89 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 FAM25CB3EWG5 89 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 FAM25GB3EWG6 89 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 CHEK1O14757 476 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 YIF1AO95070 293 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 GABARAPO95166 117 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 CD5P06127 495 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 P0C879 139 aa10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 ZNF182P17025 639 aaPredicted RBP10.64□□□□□ -0.71
SNRNP40-203ENST00000463988 CTF1Q16619 201 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms