RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MRPS6P82932 125 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 PSG5Q15238 335 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 GUSBP1Q15486 140 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 NNATQ16517 81 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 GAGE13Q4V321 117 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 Q6ZVL8 140 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 PRELID3AQ96N28 172 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 KRTAP17-1Q9BYP8 105 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 RNASE7Q9H1E1 156 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 HES4Q9HCC6 221 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 TNFRSF19Q9NS68 423 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 LINC00312Q9Y6C7 94 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 R4GMQ9 66 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 TRIP12Q14669 1992 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF292O60281 2723 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 A0A0A6YYD5 115 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 TRBV9A0A0B4J1U6 114 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 A1L4Q6 167 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 K7EN84 100 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 ENSAO43768 121 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 AMY1AP04745 511 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CT45A6P0DMU7 189 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CT45A5P0DMU8 189 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CT45A7P0DMV0 189 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 COX8AP10176 69 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 RPL7P18124 248 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CSN1S1P47710 185 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 NMUP48645 174 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 RANBP2P49792 3224 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 FOXA3P55318 350 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 SERF2P84101 59 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 SRSF2Q01130 221 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 RPL18Q07020 188 aaKnown RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 FUT7Q11130 342 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 FHL3Q13643 280 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 FAM53BQ14153 422 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CT45A1Q5HYN5 189 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 LYSMD4Q5XG99 296 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 Q6AWC8 147 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CXCL17Q6UXB2 119 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 H1FNTQ75WM6 255 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 TBC1D26Q86UD7 250 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF525Q8N782 197 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 TEX45Q8NA69 505 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 OR2A1Q8NGT9 310 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CT45A3Q8NHU0 189 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 TAF15Q92804 592 aaKnown RBP eCLIP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 C18orf15Q96N68 181 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 MAP1LC3CQ9BXW4 147 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 MS4A6AQ9H2W1 248 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 C11orf1Q9H5F2 150 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF331Q9NQX6 463 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 PSENENQ9NZ42 101 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 KLRF1Q9NZS2 232 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 ANAPC10Q9UM13 185 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CHD6Q8TD26 2715 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 HEATR5BQ9P2D3 2071 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 IGLV3-16A0A075B6K0 115 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 C17orf102A2RUQ5 167 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 C4orf51C9J302 202 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 FNDC10F2Z333 226 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 RER1O15258 196 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 FOXH1O75593 365 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 HLA-DQA1P01909 254 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 CD24P25063 80 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 CD27P26842 260 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 SPINT3P49223 89 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 NDUFV3P56181 108 aaKnown RBP2.98□□□□□ -1.93
COL8A1-205ENST00000463753 HBG1P69891 147 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 HBG2P69892 147 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 KLRD1Q13241 179 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF146Q15072 292 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 TRIP6Q15654 476 aaKnown RBP2.98□□□□□ -1.93
COL8A1-205ENST00000463753 PDLIM3Q53GG5 364 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-205ENST00000463753 LCNL1Q6ZST4 164 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 C1QL2Q7Z5L3 287 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 YAF2Q8IY57 180 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM178AQ8NBL3 297 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 OR52N5Q8NH56 324 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 NRGNQ92686 78 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM54Q969K7 222 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 ARRDC1-AS1Q9H2J1 176 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 NHP2Q9NX24 153 aaKnown RBP2.98□□□□□ -1.93
COL8A1-205ENST00000463753 C19orf25Q9UFG5 118 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-205ENST00000463753 OR2W1Q9Y3N9 320 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 SOX21Q9Y651 276 aaPredicted RBP2.98□□□□□ -1.93
COL8A1-205ENST00000463753 CEP192Q8TEP8 1941 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 TMSB15BA0A087X1C1 80 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 A0A0J9YW62 118 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 IGLV3-19P01714 112 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF823P16415 610 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 EVI2AP22794 236 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 TAS2R45P59539 299 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 SLC38A11Q08AI6 406 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 FOXI1Q12951 378 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 SGCBQ16585 318 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 RTL8BQ17RB0 113 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 LYPD6Q86Y78 171 aa2.98□□□□□ -1.93
COL8A1-205ENST00000463753 LRRC25Q8N386 305 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms