RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 NANOGP1Q8N7R0 232 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 OR10W1Q8NGF6 305 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 DGCR14Q96DF8 476 aaKnown RBP5.48□□□□□ -1.53
SMC3-202ENST00000462899 FAM210BQ96KR6 192 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 HSD17B10Q99714 261 aaKnown RBP5.48□□□□□ -1.53
SMC3-202ENST00000462899 C9orf16Q9BUW7 83 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 MS4A6AQ9H2W1 248 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 C21orf62Q9NYP8 219 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 OR2W1Q9Y3N9 320 aa5.48□□□□□ -1.53
SMC3-202ENST00000462899 IGKV3-7A0A075B6H7 116 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 IGHV3-49A0A0A0MS15 119 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 UPK2O00526 184 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 NUPL2O15504 423 aaKnown RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 RBFOX2O43251 390 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMC3-202ENST00000462899 SLC22A5O76082 557 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 HRASP01112 189 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 IFNA10P01566 189 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 HIST1H1DP16402 221 aaKnown RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 GNB3P16520 340 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 NFYAP23511 347 aaPredicted RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 CRHBPP24387 322 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 CLDN12P56749 244 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 C2orf76Q3KRA6 126 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 THOC7Q6I9Y2 204 aaKnown RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 ZNF773Q6PK81 442 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 ZNF66Q6ZN08 573 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 TMEM91Q6ZNR0 172 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 TCTEX1D2Q8WW35 142 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 ST8SIA2Q92186 375 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 FAM3DQ96BQ1 224 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 RAB3CQ96E17 227 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 GPHA2Q96T91 129 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 QTRT1Q9BXR0 403 aaKnown RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 TMEM14BQ9NUH8 114 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 FKBP14Q9NWM8 211 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 SMPD3Q9NY59 655 aaPredicted RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 TBC1D24Q9ULP9 559 aa5.47□□□□□ -1.53
SMC3-202ENST00000462899 LSM2Q9Y333 95 aaKnown RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 F11RQ9Y624 299 aaKnown RBP5.47□□□□□ -1.53
SMC3-202ENST00000462899 IGHV3OR16-13A0A075B7E8 117 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 TRAV14DV4A0A0A6YYC5 116 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 IGHV3-21A0A0B4J1V1 117 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 IGHV3-74A0A0B4J1X5 117 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 ZNF561-AS1K7EIQ3 104 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 MYL12BO14950 172 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 DENRO43583 198 aaKnown RBP5.46□□□□□ -1.54
SMC3-202ENST00000462899 IFNA21P01568 189 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 IFNA17P01571 189 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 APOHP02749 345 aaPredicted RBP5.46□□□□□ -1.54
SMC3-202ENST00000462899 CD5P06127 495 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 DTYMKP23919 212 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 TAS2R31P59538 309 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 MSMO1Q15800 293 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 RAB11BQ15907 218 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 TCF24Q7RTU0 167 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 STHQ8IWL8 128 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 OR10R2Q8NGX6 335 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 GRAMD2BQ96HH9 432 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 C20orf173Q96LM9 149 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 NXF2Q9GZY0 626 aaKnown RBP5.46□□□□□ -1.54
SMC3-202ENST00000462899 PLGRKTQ9HBL7 147 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 NDUFA4L2Q9NRX3 87 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 CLEC5AQ9NY25 188 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 TAS2R8Q9NYW2 309 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 PSORS1C1Q9UIG5 152 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 ELF5Q9UKW6 265 aaPredicted RBP5.46□□□□□ -1.54
SMC3-202ENST00000462899 SPATA2Q9UM82 520 aa5.46□□□□□ -1.54
SMC3-202ENST00000462899 I3L2K1 104 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 J3QRK9 145 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 K7EQG2 157 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 OR13C7P0DN81 318 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 NAT1P18440 290 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 FAM3BP58499 235 aaPredicted RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 PAFAH1B2P68402 229 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 MRPS15P82914 257 aaKnown RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 RELQ04864 619 aaPredicted RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 ZFP1Q6P2D0 407 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 ZNF705AQ6ZN79 300 aaPredicted RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 HSD17B13Q7Z5P4 300 aaPredicted RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 C6orf223Q8N319 242 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 DCANP1Q8TF63 244 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 CMTM3Q96MX0 182 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 NEU1Q99519 415 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 DCSTAMPQ9H295 470 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 TMEM140Q9NV12 185 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 RAB22AQ9UL26 194 aa5.45□□□□□ -1.54
SMC3-202ENST00000462899 AK6Q9Y3D8 172 aaKnown RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
SMC3-202ENST00000462899 NBDYA0A0U1RRE5 68 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 TEX50A0A1B0GTY4 177 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 KNCNA6PVL3 124 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 ZNF705FA8MVS1 300 aaPredicted RBP5.44□□□□□ -1.54
SMC3-202ENST00000462899 EPM2AB3EWF7 344 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 CYB5BO43169 146 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 HPRT1P00492 218 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 CTXN2P0C2S0 81 aa5.44□□□□□ -1.54
SMC3-202ENST00000462899 ZNF705DP0CH99 300 aaPredicted RBP5.44□□□□□ -1.54
SMC3-202ENST00000462899 ZNF705BP0CI00 300 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms