RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SIGLEC9Q9Y336 463 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 MINOS1-NBL1R4GNA1 71 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 MED13LQ71F56 2210 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 LRBAP50851 2863 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 MAP1LC3B2A6NCE7 125 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 NDUFS8O00217 210 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 SLC25A17O43808 307 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 NDUFA3O95167 84 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 IGHV4-39P01824 125 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 BCL2P10415 239 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 PPT1P50897 306 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 ERHP84090 104 aaKnown RBP8.71□□□□□ -1.01
IFT88-204ENST00000461115 CD69Q07108 199 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 BTN1A1Q13410 526 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 EBI3Q14213 229 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 FFAR4Q5NUL3 377 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 OR10G9Q8NGN4 311 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 OR10G7Q8NGN6 311 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 SUN5Q8TC36 379 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 RARRES2Q99969 163 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 MAP1LC3BQ9GZQ8 125 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 SLC39A9Q9NUM3 307 aa8.71□□□□□ -1.01
IFT88-204ENST00000461115 IGHV2-70DA0A0C4DH43 119 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 IGLC7A0M8Q6 106 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 VWC2LB2RUY7 222 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 VENTXO95231 258 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 CRYGCP07315 174 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 COX7A1P24310 79 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 PAX6P26367 422 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 NPBWR1P48145 328 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 COMPP49747 757 aaPredicted RBP8.71□□□□□ -1.02
IFT88-204ENST00000461115 PDLIM4P50479 330 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 ELLP55199 621 aaPredicted RBP8.71□□□□□ -1.02
IFT88-204ENST00000461115 DLX1P56177 255 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 SSBP2P81877 361 aaPredicted RBP8.71□□□□□ -1.02
IFT88-204ENST00000461115 MRPL41Q8IXM3 137 aaKnown RBP8.71□□□□□ -1.02
IFT88-204ENST00000461115 ZNF843Q8N446 348 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 OR10W1Q8NGF6 305 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 RAB24Q969Q5 203 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 SLC45A2Q9UMX9 530 aa8.71□□□□□ -1.02
IFT88-204ENST00000461115 TBL2Q9Y4P3 447 aaKnown RBP8.71□□□□□ -1.02
IFT88-204ENST00000461115 ABCA2Q9BZC7 2435 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 IGKV1OR2-108A0A075B7D4 117 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 FOXH1O75593 365 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 IFNA1P01562 189 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 LINC00869P0C866 280 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 STAG3L2P0CL84 134 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 STAG3L3P0CL85 134 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 RNF224P0DH78 156 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 HOXB4P17483 251 aaPredicted RBP8.7□□□□□ -1.02
IFT88-204ENST00000461115 PSMB3P49720 205 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 SUB1P53999 127 aaKnown RBP eCLIP8.7□□□□□ -1.02
IFT88-204ENST00000461115 RAB31Q13636 194 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 LCN15Q6UWW0 184 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 RBMS3Q6XE24 437 aaKnown RBP8.7□□□□□ -1.02
IFT88-204ENST00000461115 MOB3BQ86TA1 216 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 PPP1R27Q86WC6 154 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 Q8N6K4 173 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 BPESC1Q9GZL8 116 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 TUBA4BQ9H853 241 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 TPSG1Q9NRR2 321 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 VAX2Q9UIW0 290 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 PXMP4Q9Y6I8 212 aa8.7□□□□□ -1.02
IFT88-204ENST00000461115 ELOA3CA0A087WX78 387 aaPredicted RBP8.69□□□□□ -1.02
IFT88-204ENST00000461115 FAM74A7A6NL05 159 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 TIMM23O14925 209 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 COL8A1P27658 744 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 RPL27AP46776 148 aaKnown RBP8.69□□□□□ -1.02
IFT88-204ENST00000461115 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
IFT88-204ENST00000461115 GAMTQ14353 236 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 FAM74A3Q4VXF1 159 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 SOHLH1Q5JUK2 328 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 FAM90A2PQ658T7 463 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 CCDC144NLQ6NUI1 221 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 VMO1Q7Z5L0 202 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 THAP8Q8NA92 274 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 SLC35E1Q96K37 410 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 TXNDC17Q9BRA2 123 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 C19orf24Q9BVV8 132 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 HINT2Q9BX68 163 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 MANBALQ9NQG1 85 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 SIRT7Q9NRC8 400 aa8.69□□□□□ -1.02
IFT88-204ENST00000461115 ZFYVE26Q68DK2 2539 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 IGHV3-72A0A0B4J1Y9 119 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 TEX22C9J3V5 150 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 TMEM250H0YL14 139 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 TSPAN9O75954 239 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 OPN1MWP04001 364 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 OPN1MW2P0DN77 364 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 OPN1MW3P0DN78 364 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 CNTFRP26992 372 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 UBE2E1P51965 193 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 B2MP61769 119 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 RHEBQ15382 184 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 HAGHQ16775 308 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 C10orf55Q5SWW7 151 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 MIC13Q5XKP0 118 aa8.68□□□□□ -1.02
IFT88-204ENST00000461115 SLC35E3Q7Z769 313 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms