RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 MAPK1IP1LQ8NDC0 245 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 NABP2Q9BQ15 211 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 NPCDR1Q9BY65 106 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 SLC35B3Q9H1N7 401 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 ZNF430Q9H8G1 570 aaPredicted RBP7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 TEX50A0A1B0GTY4 177 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 UPK2O00526 184 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 TAGLN2P37802 199 aaKnown RBP7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 CDC34P49427 236 aaPredicted RBP7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 ACOT6Q3I5F7 207 aaPredicted RBP7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 EIF4E3Q8N5X7 224 aaKnown RBP7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 LFNGQ8NES3 379 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 OR2T6Q8NHC8 308 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 CHODLQ9H9P2 273 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 TNFRSF19Q9NS68 423 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 PXMP4Q9Y6I8 212 aa7.6□□□□□ -1.19
NUDCD3-203ENST00000460110 PAGE4O60829 102 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 SCAF4O95104 1147 aaKnown RBP7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 IFNA1P01562 189 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 IGFBP2P18065 325 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 OR10J1P30954 320 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 AWAT1Q58HT5 328 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 FAM78BQ5VT40 261 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ZNF439Q8NDP4 499 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ZNF596Q8TC21 504 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 NEU4Q8WWR8 484 aaPredicted RBP7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 CORO2AQ92828 525 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 SLC35E1Q96K37 410 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 RBFOX2O43251 390 aaKnown RBP eCLIP7.59□□□□□ -1.192e-6■■■■□ 22.8
NUDCD3-203ENST00000460110 IGKV1D-33P01593 117 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 IGKV1-33P01594 117 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ADIRFQ15847 76 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 TMEM41BQ5BJD5 291 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 NIPSNAP3BQ9BS92 247 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 C11orf1Q9H5F2 150 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 RPH3ALQ9UNE2 315 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 KPTNQ9Y664 436 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 HELZ2Q9BYK8 2649 aaKnown RBP7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 E7EUB6 86 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 IGHV2-70P01814 119 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ORM2P19652 201 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 PSMB3P49720 205 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 ATP6V1FQ16864 119 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 SSX7Q7RTT5 188 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 CCL19Q99731 98 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 KIAA1456Q9P272 454 aa7.59□□□□□ -1.19
NUDCD3-203ENST00000460110 PRRC2AP48634 2157 aaKnown RBP7.59□□□□□ -1.2
NUDCD3-203ENST00000460110 IGHV3-35A0A0C4DH35 117 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 TOX4O94842 621 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 OR10J4P0C629 311 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 HLA-DRB5Q30154 266 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 TEPPQ6URK8 271 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 ZNF429Q86V71 674 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 NECAP1Q8NC96 275 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 OR4P4Q8NGL7 312 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 VSTM2AQ8TAG5 236 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 OSR1Q8TAX0 266 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 NPIPB3Q92617 1050 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 NPVFQ9HCQ7 196 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 RAI1Q7Z5J4 1906 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 SH2D7A6NKC9 451 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 RPL27AP46776 148 aaKnown RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 EIF4EBP1Q13541 118 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 CR1LQ2VPA4 569 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 KLF17Q5JT82 389 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 SMIM7Q9BQ49 75 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 FKBP11Q9NYL4 201 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 IGHV1-3A0A0C4DH29 117 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 A6NNC1 897 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 NUDT19A8MXV4 375 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 FCN1O00602 326 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 MC5RP33032 325 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 GPX4P36969 197 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 SERF2P84101 59 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 TREML4Q6UXN2 200 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 DDB2Q92466 427 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 SEC11CQ9BY50 192 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 GSX1Q9H4S2 264 aaPredicted RBP7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 SMCO4Q9NRQ5 59 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 DPM3Q9P2X0 92 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 WNK1Q9H4A3 2382 aa7.58□□□□□ -1.2
NUDCD3-203ENST00000460110 C7orf77A4D0Y5 90 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 BUB1B-PAK6H3BSN5 160 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 MOSP00540 346 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 USF1P22415 310 aaPredicted RBP7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 RND2P52198 227 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 FAM24BQ8N5W8 94 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 KIR3DL3Q8N743 410 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 TOLLIPQ9H0E2 274 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 FLNBO75369 2602 aaKnown RBP7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 H3BTX0 84 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 RBP4P02753 201 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 AREGP15514 252 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 SUB1P53999 127 aaKnown RBP eCLIP7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 DHRS7BQ6IAN0 325 aaPredicted RBP7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 SPSB3Q6PJ21 355 aa7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 BBC3Q96PG8 261 aaPredicted RBP7.57□□□□□ -1.2
NUDCD3-203ENST00000460110 KAAG1Q9UBP8 84 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms